Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 645 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  218 bits (555), Expect = 7e-61
 Identities = 157/486 (32%), Positives = 248/486 (51%), Gaps = 18/486 (3%)

Query: 196 LGEGRAMGAYSLGQG-FLNSSSSTRFDELLQQLEKIQAEYGLKLQDALGSSKAAHAALDG 254
           +G  RA+      +G F+ S S     EL++ ++  ++ Y + ++D +      +AA   
Sbjct: 171 VGTARALLENGKAKGVFVVSVSLKNLTELVKSIKLGESGYVMLVEDGVVLVDPRNAA--- 227

Query: 255 LAKSSNASLKQGSELFEEQVVMAETLDAPWQDFYDGVSRLMAQTYQLDDATLTFLGQQLE 314
                  + K    L      +AET         DGV   MA  +        ++G    
Sbjct: 228 ------HNFKPLKGLGAAYAQLAETPQGSTDVVIDGV-HYMANVWTSPGLGWRYIGLIEH 280

Query: 315 QRLAQNRTHMVVLVSALSAVFLLIFYLYAGFYASTRTTLRRLGAMMDKVAA-----GDMT 369
           + +    T M  L + +  V +LIF L A   A ++  ++ +G +   + +     GD+ 
Sbjct: 281 REVMAEATRMTYLTALIVGVLVLIFGLIAA--AFSKVIVKPIGQVSTGLQSIAQGEGDLR 338

Query: 370 VTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQ 429
                Q +DE  +L   FN  +A I  LI+ +G   + ++  +     V+   N+A   Q
Sbjct: 339 HELQVQGKDETAELAGWFNKFLAAIRQLIQHIGAASANLQNASKVNSEVAHNMNEAAGRQ 398

Query: 430 RMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEI 489
           R  +E V+TA N+M +TA EVARS + A  SA + +     G+  ++    ++ RL   +
Sbjct: 399 REAVELVSTAFNEMVATANEVARSCSGAAESAENGHRRVAEGKQQIEVTTDNVNRLGRRL 458

Query: 490 DQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 549
            +S Q + +L   S+SI+ +L  I++IAEQTNLLALNAAIEAARAG+QGRGFAVVADEVR
Sbjct: 459 TESSQAMVELEAGSRSINQILGTIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVR 518

Query: 550 TLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVG 609
            LA+RT  ST EIEQ++  L++      + MGS  D++  +V   E  + + E I  +V 
Sbjct: 519 ALAKRTSDSTGEIEQLLGTLENKTQEVTQKMGSCLDLSRASVSSIESARDSFEGIQTSVN 578

Query: 610 MIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQ 669
            I DQN QI+AA E+Q +VA +I+++I +I          A   +  S +LS    EL  
Sbjct: 579 EIRDQNLQISAAAEEQHSVAEEINRHIQQIYDEARLVESLANSAQDDSGRLSNLSDELNG 638

Query: 670 LIGAFR 675
           L+G F+
Sbjct: 639 LVGRFK 644



 Score = 32.7 bits (73), Expect = 5e-05
 Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 8/130 (6%)

Query: 72  TLNNQVQINATLGQSGKAGDLEGKISAL-EQSVLSRLQSLNAMATEPEQIAAFDAKRDEL 130
           T ++Q  +    G S     + G I A+ EQ+ L  L +    A   +Q   F    DE+
Sbjct: 459 TESSQAMVELEAG-SRSINQILGTIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEV 517

Query: 131 IAAFKAQQQETSLLSKSALIGKLLNKAQMLSQIIASQAGLSRDSQSDLRQLSE----LIT 186
            A  K     T  + +  L+G L NK Q ++Q + S   LSR S S +    +    + T
Sbjct: 518 RALAKRTSDSTGEIEQ--LLGTLENKTQEVTQKMGSCLDLSRASVSSIESARDSFEGIQT 575

Query: 187 SVTPLVTQTL 196
           SV  +  Q L
Sbjct: 576 SVNEIRDQNL 585