Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  229 bits (585), Expect = 2e-64
 Identities = 135/314 (42%), Positives = 185/314 (58%)

Query: 363 VAAGDMTVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQS 422
           VA+GD+T       RDE   L Q        + D I R+  + +Q+   + ++  V+  +
Sbjct: 228 VASGDLTGEISVCGRDEPARLQQALKSMQENLRDTIRRISESSNQLASASEELSCVTEDA 287

Query: 423 NQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSI 482
            + +  Q  +IEQ ATA+NQM++  +EVA +A A   ++   +     GR  VQ    SI
Sbjct: 288 TRGLHQQSQEIEQAATAVNQMTAAVEEVASNAVATSQASRESDRIAQRGREQVQQTVVSI 347

Query: 483 ARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFA 542
             LAT++  +V  +  LA     IS VL+VI+SIAEQTNLLALNAAIEAARAG+ GRGFA
Sbjct: 348 EALATDVTDNVTQVEDLAQKVYGISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFA 407

Query: 543 VVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALE 602
           VVADEVR LA RTQ ST+EIEQMIS +Q G   AV +M  S+  A  T+  ++    ALE
Sbjct: 408 VVADEVRALAHRTQQSTQEIEQMISGIQQGTDQAVSSMQQSNTRARSTLDIAKSAGTALE 467

Query: 603 NILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSL 662
            I  A  +I ++N  IA+A EQQ AVA ++D+N++ I       + GA QT AAS  LS 
Sbjct: 468 EIASAFTLINERNLVIASASEQQAAVAREVDRNLMNIRDLAHQTSTGANQTSAASHDLSR 527

Query: 663 QVIELKQLIGAFRV 676
             ++L  L+  F V
Sbjct: 528 LAVDLNTLVARFSV 541



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 30/183 (16%)

Query: 52  VELQSLDLLGSSLALRRDLETLNNQVQINATLGQSGKAGDLEGKISALEQSVLSRLQ--- 108
           + L +L  +G ++ L R +     Q   +  + Q   +GDL G+IS   +   +RLQ   
Sbjct: 196 IVLTALVTIGLAVLLTRSIVLPLAQ---SLKVAQGVASGDLTGEISVCGRDEPARLQQAL 252

Query: 109 ----------------SLNAMATEPEQIAAF--DAKRDELIAAFKAQQQETSLLSKSALI 150
                           S N +A+  E+++    DA R     + + +Q  T++   +A +
Sbjct: 253 KSMQENLRDTIRRISESSNQLASASEELSCVTEDATRGLHQQSQEIEQAATAVNQMTAAV 312

Query: 151 GKLLNKAQMLSQIIASQAGLSRDSQSDLRQ----LSELITSVTPLVTQTLGEGRAMGAYS 206
            ++ + A   SQ       +++  +  ++Q    +  L T VT  VTQ   E  A   Y 
Sbjct: 313 EEVASNAVATSQASRESDRIAQRGREQVQQTVVSIEALATDVTDNVTQV--EDLAQKVYG 370

Query: 207 LGQ 209
           + +
Sbjct: 371 ISK 373