Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  217 bits (553), Expect = 1e-60
 Identities = 140/364 (38%), Positives = 197/364 (54%), Gaps = 9/364 (2%)

Query: 317 LAQNRTHMVVLVSALSAVFLLIFYLYAGFYASTRTTLRRLGAMMDKVAA-GDMTVTFVAQ 375
           L+Q RT  ++ +    A    +  L      S  TT+ R  AM D     GD+T     Q
Sbjct: 285 LSQFRTSAIIAMLIAVAAIAGLLGLLIPVLMSPLTTMGR--AMRDIAEGEGDLTRRLAVQ 342

Query: 376 SRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSG---QRMQ 432
           ++DE G+L   FN  V +IH  I  V    S   L     E V + SN ++ G   Q M+
Sbjct: 343 NKDEFGELATSFNRFVERIHASISEVS---SATRLVHDLSEKVVSASNASIIGSEEQSMR 399

Query: 433 IEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQS 492
              VA A+N++ +  QE+AR+AA A   A   +++   GR +V+    ++  L+  I +S
Sbjct: 400 TNSVAAAINELGAATQEIARNAADASQHASGASEQAHGGREVVEEAISAMTALSQRISES 459

Query: 493 VQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLA 552
              I  L   +  I  +L+VIK I++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA
Sbjct: 460 CAQIETLNASTDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLA 519

Query: 553 RRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIV 612
            RTQ S EEI +MI+ LQ G   AV  M +S   +  TV  + +  + L ++   +G I 
Sbjct: 520 HRTQESAEEIHRMITSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEID 579

Query: 613 DQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLIG 672
             NQ +A A E+QTAV   ++ +I +IN   +   E   +T     QL+ Q   LKQL+G
Sbjct: 580 GMNQSVATATEEQTAVVESLNLDITQINALNQQGVENLNETLRHCDQLAQQAGRLKQLVG 639

Query: 673 AFRV 676
           +FR+
Sbjct: 640 SFRI 643