Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 716 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  232 bits (592), Expect = 4e-65
 Identities = 155/398 (38%), Positives = 221/398 (55%), Gaps = 12/398 (3%)

Query: 281 DAPWQDFYDGVSRLMAQTYQLDDATLTFLGQQLEQRLAQNRTHMVVLVSALSAVFLLIFY 340
           DAPW     GV   + ++  ++ A +  L +QL+QR        + L    + V LL  +
Sbjct: 329 DAPW-----GVLLDIPESVLIEPAEV--LRRQLDQRNTTGSLVELGLGLLAAIVGLLFIW 381

Query: 341 LYAGFYASTRTTLRRLGAMMDKVAAGD--MTVTFVAQSRDELGDLGQVFNGTVAKIHDLI 398
           + A    S    + R+  M+  +A+GD  +T+    + +DELG+L   FN  + K+   I
Sbjct: 382 MMA---RSVTKPILRVAYMLRDIASGDGNLTLRLAYEKQDELGELVAWFNSLLDKLQPTI 438

Query: 399 ERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAV 458
             V  +V      A +   ++ Q++  +  Q  Q+  V TA  +M++TAQ+VARSAA A 
Sbjct: 439 AEVKRSVQAARATADESAAIARQTSNGMEEQSRQVHLVVTASQEMNATAQDVARSAAQAA 498

Query: 459 SSAHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAE 518
            +A   +  T  G S++     SI  LA ++ +++  +  LAT S+ I  VLEVI+SIAE
Sbjct: 499 KAACDADQATREGLSVIGRTTSSIDHLAADMSEAMSQVESLATHSEKIGMVLEVIRSIAE 558

Query: 519 QTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVK 578
           QTNLLALNAAIEAARAGE GRGFAVVADEVR LARRTQ S EE   +I  LQSG  + V 
Sbjct: 559 QTNLLALNAAIEAARAGEAGRGFAVVADEVRNLARRTQESVEETRIVIEHLQSGTESVVT 618

Query: 579 AMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVE 638
           AM  S  +ASG+V Q  +   AL  I  AV +I   N QIA+A E+Q AVA +I+ NI  
Sbjct: 619 AMSKSQRLASGSVDQVSQAVTALSQIGDAVTVITSMNLQIASAAEEQNAVAEEINCNISI 678

Query: 639 INRAGEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676
           I    E  ++ A ++   S  +     + + L+  FRV
Sbjct: 679 IRDVTESMSDRASESARISDSIYKLANQQQVLMNQFRV 716