Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 712 a.a., Methyl-accepting chemotaxis protein McpU from Pseudomonas sp. DMC3

 Score =  235 bits (599), Expect = 6e-66
 Identities = 140/354 (39%), Positives = 209/354 (59%), Gaps = 5/354 (1%)

Query: 325 VVLVSALSAVFLLIFYLYAGFYASTRTTLRRLGAMMDKVAAG--DMTVTFVAQSRDELGD 382
           +++      V LL+ +L A   +     +  +  M+  +A+G  D+T       +DELG+
Sbjct: 362 LLVAGVAGLVGLLLIWLTA---SGVTRPINSVAEMLKNIASGEGDLTQRLNYSKKDELGE 418

Query: 383 LGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMNQ 442
           L   FN  + K+   I ++  ++++    A Q   ++ Q+++ +  Q  +I+QVATA N+
Sbjct: 419 LVNWFNRFLDKLQPTIAQIKQSITEARGTADQSSEIARQTSEGMQVQFREIDQVATASNE 478

Query: 443 MSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLATD 502
           MS+TA +VA SA+ A ++A   +     G ++++     I +LA E+ ++V  +  LA +
Sbjct: 479 MSATAHDVANSASNAANAAKGADQSAKDGMAIIERSTRDINQLADEVSKAVTEVEALAVN 538

Query: 503 SQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEEI 562
           S+ I SVLEVI+SIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RTQ S EEI
Sbjct: 539 SEQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSVEEI 598

Query: 563 EQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAAV 622
             +I R+Q+G    V  M SS   A    GQ  +   AL  I  AV +I D N QIA+A 
Sbjct: 599 RIVIERIQTGTRGVVATMHSSQTQAHNNAGQIRQAVDALGKISDAVTVISDMNLQIASAA 658

Query: 623 EQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676
           E+Q+AVA ++++N+  I    E   E A ++ A S QL+    +  +L+  FRV
Sbjct: 659 EEQSAVAEEVNRNVSAIRTVTETLTEQATESAAISSQLNSLASQQMKLMDQFRV 712