Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 511 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  246 bits (627), Expect = 2e-69
 Identities = 153/410 (37%), Positives = 239/410 (58%), Gaps = 9/410 (2%)

Query: 270 FEEQVVMAETLDAPWQDFYDGVSRLMAQTYQLDDATLTFLGQQLEQRLAQNRTHMVVLVS 329
           F E++     L A  +  YD + +  AQ     +         ++  L +N     VL+ 
Sbjct: 108 FNEKLAEYTGLLAQEKTVYDQLHQRAAQVVDRVNQAYVAEDASMQAELKKN----TVLII 163

Query: 330 ALSAVFLLIFYLYAGFYASTR---TTLRRLGAMMDKVAAGDMTVTFVAQSRDELGDLGQV 386
             SA+ LL+  L A  +  TR     LR +  +  ++AAGD+T       RDE+G L   
Sbjct: 164 GSSALALLVGLLAA--WVITRLIVAPLRSVIRVAQQIAAGDLTAKVEVTRRDEMGQLMLA 221

Query: 387 FNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMNQMSST 446
                A +  ++  +   + ++   A  +  V+ Q+N  V+ Q+ + EQVATAMNQM++T
Sbjct: 222 MQQMAAGLGTIVSGLQAGIERLAGSAQSLSAVTEQTNLEVNSQKEETEQVATAMNQMTAT 281

Query: 447 AQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLATDSQSI 506
             +VAR+A  A  +A + +D+  SG+ +V+     I +LA     +   I  L+ + Q+I
Sbjct: 282 VHDVARNAEEAALAAQTADDKVESGQQVVRQSMARIEQLADSATSASSSIESLSAEIQNI 341

Query: 507 SSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEEIEQMI 566
            +VLEVIKS+AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LARRTQ STEEIE+++
Sbjct: 342 GTVLEVIKSVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALARRTQQSTEEIERLV 401

Query: 567 SRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAAVEQQT 626
           S L++   ++V+ + SS ++    V  + + + AL +I  AV +I   NQQIAAA E+Q+
Sbjct: 402 SALRAAAQSSVQQIRSSGELVKLAVSDALQTESALGSIAAAVSLIQQMNQQIAAAAEEQS 461

Query: 627 AVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676
           +VA +I++++ +I  + +H++       A+S +L+    EL+ ++G FR+
Sbjct: 462 SVAEEINRSVTQIRASADHSSVAMRGNAASSVELAQLGGELRSMVGHFRL 511



 Score = 32.7 bits (73), Expect = 4e-05
 Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 14/149 (9%)

Query: 49  GTRVELQSL----DLLGSSLALRRDLETLNNQVQINATLGQSGKAGDLEGKISALEQSVL 104
           G +V  QS+     L  S+ +    +E+L+ ++Q   T+        LE   S  EQ+ L
Sbjct: 306 GQQVVRQSMARIEQLADSATSASSSIESLSAEIQNIGTV--------LEVIKSVAEQTNL 357

Query: 105 SRLQSLNAMATEPEQIAAFDAKRDELIAAFKAQQQETSLLSKSALIGKLLNKAQMLSQII 164
             L +    A   EQ   F    DE+ A  +  QQ T  + +  L+  L   AQ   Q I
Sbjct: 358 LALNAAIEAARAGEQGRGFAVVADEVRALARRTQQSTEEIER--LVSALRAAAQSSVQQI 415

Query: 165 ASQAGLSRDSQSDLRQLSELITSVTPLVT 193
            S   L + + SD  Q    + S+   V+
Sbjct: 416 RSSGELVKLAVSDALQTESALGSIAAAVS 444