Pairwise Alignments

Query, 707 a.a., thymidine phosphorylase from Pseudomonas simiae WCS417

Subject, 719 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  647 bits (1670), Expect = 0.0
 Identities = 390/734 (53%), Positives = 483/734 (65%), Gaps = 51/734 (6%)

Query: 1   MHNDAKVVPF----NKASATPSPLARLPVVLLQVRDKAAQQLQQGLQDLFDNADDTLFEM 56
           M  + KVVP     ++   TP P   LPV+LLQVRDKAA QL+QGLQDLFDNADDTLFEM
Sbjct: 1   MQKEGKVVPLAATIDRGGRTPHPC--LPVLLLQVRDKAALQLRQGLQDLFDNADDTLFEM 58

Query: 57  ADKARNNLDHHIFFEAMRDLRLKRKNFERVFMERLFEAFASLGQAGRGELQLVPVVSYDA 116
           ADKA +  D +++FEAMRDLRLKRK+ ER F++   +AF   GQ        V +++  A
Sbjct: 59  ADKAFDRGDQNLYFEAMRDLRLKRKSIERGFLDTFHDAFLRAGQ--------VDLLANLA 110

Query: 117 APGSSRD--DLEKAVTLEAMLDRVRHRDGLALGQLTARLSALLGNHLDDRENPLGPALLC 174
            PG  R    +E+A  +E M+ RV  RDG+AL QL  RL ALL   L ++ NPLGPA LC
Sbjct: 111 QPGKPRSKAQMERAAAIEGMVARVLSRDGVALQQLGLRLQALLDRPLYEQHNPLGPAALC 170

Query: 175 ECFLRAGRSLGVEIRVKLIMLKLFEKYVLSDADQLYGEANQLLVATGVLPELKAVPSRRR 234
             FL AGR+LGV +RVKL++LKLFE+YVL D D +YGEANQLL A GVLPEL+  P RR 
Sbjct: 171 RYFLDAGRNLGVGLRVKLVLLKLFERYVLRDVDVIYGEANQLLAAAGVLPELQPAPRRRA 230

Query: 235 EAREAR------ELAREETLPPVDENGQEAFAALQPLLTAVRGSVAPTLEASAEPLPISP 288
           E R  R       L +EE     D  GQ  FA+LQ LL  VRG  AP L+A A   PIS 
Sbjct: 231 EDRRMRVRPGPANLGQEEG---ADAAGQALFASLQALLAPVRGQFAPRLQAVAAAQPIST 287

Query: 289 RDLLRLLSHLQQYVPEPEVEDDFDLRNQLEQLLTRVSVKSGKSRVVEEADEDVINLVALL 348
            DLLRLLSHLQ+YVP     DDF+L  QLEQLL RVSV+SG  R +  ADED+INLV LL
Sbjct: 288 ADLLRLLSHLQRYVPATYEADDFELGQQLEQLLLRVSVRSGTRRRLHVADEDMINLVGLL 347

Query: 349 FEFILNDRAVPDAYKALIGRLQIPMLKVAVLDKSLFSRASHPARRLLNEIATAAMG---- 404
           F FI ND  +P + +ALI RL IP+LKVA+LDK LFSR+SHPARRLLNEIA AA+G    
Sbjct: 348 FAFIHNDDNLPASLRALITRLHIPLLKVALLDKGLFSRSSHPARRLLNEIAGAAIGWECG 407

Query: 405 -ASQRDPLYLRIEQVVQRLLNEFVEDPVIFSQLLAEFSAFTADERRRSDLLEQHTRDAEA 463
              QRD L++R+E++VQRLLN+F +D  +F++LL +F AF  DERRR++LLEQ TRDAE 
Sbjct: 408 SECQRDSLHMRVERIVQRLLNDFADDASLFAELLDDFLAFNQDERRRNELLEQRTRDAEE 467

Query: 464 GRVRTEAARQRVADVLNKRLLGKTLPRPVVQFLQQAWSQVLLLASLKHGEQSVQWQAGLR 523
           GR R   ARQ+V  VLN+RL G+ LP+ VVQ L QAWSQVLLLA LK GE S  W+  ++
Sbjct: 468 GRARAMQARQQVQHVLNQRLRGRVLPQVVVQMLVQAWSQVLLLAWLKQGEASQAWRDAVQ 527

Query: 524 TMDELIWSVGLQQDTEAGRHLLGQLPGLLKALRDGLTSAAFDPFSTREFFVRLQALHVQA 583
           TMD L+ S+    + +A   LL Q+PGLLKALRDGL S A D  +TREFF++L+ LH++A
Sbjct: 528 TMDMLLASITPPHEPQA---LLQQVPGLLKALRDGLASVALDAVATREFFLQLEQLHLRA 584

Query: 584 PGG------------GDEWIEVREPFVLTSALPD---PVRDLPDNDPDLLKARQLKVGDW 628
             G            GD  + V +  VLT A      P+         L +A++L++G W
Sbjct: 585 CAGKEALPSGEGQSLGD--VLVEQEIVLTIAEEPACVPLHTADGQAAALRQAQRLRIGTW 642

Query: 629 VVFEGDEATTLRCRLTAIMAPADTYVFTSRTGLKVLEKSAGQLAVAFKRGALHTLDAGPL 688
           V    DE   LRC+L A +  +D  VF +RTG+KV E S+  LA A +R  +  LD   L
Sbjct: 643 VEVL-DEDEPLRCKLVARIDSSDRLVFANRTGMKVREWSSASLAQALQRHEVRVLDDRLL 701

Query: 689 FERALTAVVGKLRQ 702
           FERAL AV+  LRQ
Sbjct: 702 FERALEAVLESLRQ 715