Pairwise Alignments

Query, 306 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 302 a.a., putative zinc ABC transporter from Pseudomonas putida KT2440

 Score =  472 bits (1215), Expect = e-138
 Identities = 238/307 (77%), Positives = 262/307 (85%), Gaps = 6/307 (1%)

Query: 1   MSRLFPVFVVFVTSLFITGAAQAEVKVLTSIKPLQLIAAAVQDGVAVPEVLLPPGASPHN 60
           MSR   +FV F+       +AQA+V+VLT+IKPLQ IAAAVQ+GV  P+VLLPPGASPH+
Sbjct: 1   MSRFLALFVAFIAL-----SAQADVRVLTTIKPLQQIAAAVQEGVGSPDVLLPPGASPHH 55

Query: 61  YALRPSDVRRVQSVDLLYWIGPDMESFLPRVLKGRTATTVAVQDLPGMKLRRFAEDNHSH 120
           YALRPSDVRRV   DLLYWIGPDME+FL RVL  R+  TVAVQ LPGMKLR F ED+HSH
Sbjct: 56  YALRPSDVRRVGDADLLYWIGPDMENFLARVLGSRSKATVAVQSLPGMKLRHFGEDSHSH 115

Query: 121 AD-DADEHDHDHRPGSLDAHLWLSTVNARVIAARMAADLAAADPANAARYQSNAKAFDER 179
            + D D+HDHDHRPGSLDAHLWLS+VNARVIAA+MAADLA  DPANAARYQSN KAFDER
Sbjct: 116 EEEDHDDHDHDHRPGSLDAHLWLSSVNARVIAAKMAADLAQVDPANAARYQSNLKAFDER 175

Query: 180 LDALDARLKARLAPIDGKPYFVFHEAFDYFEEAYGLKHAGVFSVAAEVQPGAQHVAAMRT 239
           LDALD R+KAR+A I GKPYFVFHEAFDYFE  YGLKHAGVFSVA+EVQPGAQHVAAMR 
Sbjct: 176 LDALDGRIKARVAGIAGKPYFVFHEAFDYFEAEYGLKHAGVFSVASEVQPGAQHVAAMRK 235

Query: 240 RLQEVGKTCVFSEPPLRPRLAETLVSGLPVKLAELDALGGYTPATAQGYEQVLEKLGNDL 299
           RLQEVGKTCVFSEPPLRPRLAETL +GLPV+LAELDALGG  P   +GYE++LEKLG DL
Sbjct: 236 RLQEVGKTCVFSEPPLRPRLAETLTAGLPVRLAELDALGGTDPVDGKGYERLLEKLGGDL 295

Query: 300 AGCLESL 306
           AGCLE L
Sbjct: 296 AGCLEQL 302