Pairwise Alignments

Query, 402 a.a., type II secretion system protein F from Pseudomonas simiae WCS417

Subject, 402 a.a., Type 4 fimbrial assembly protein PilC from Pseudomonas putida KT2440

 Score =  343 bits (879), Expect = 7e-99
 Identities = 182/400 (45%), Positives = 263/400 (65%)

Query: 1   MDNASTLYAWEGINRKGRRVSGQTTGHNPALVKAQLRKQGICPGHVRKKSPVLSSLAASI 60
           M ++S LY W G +  G  VSGQT G +PA V+A L +QGI    +R  S +  SL    
Sbjct: 1   MTSSSLLYHWHGTDANGAPVSGQTPGRSPAYVRAGLIRQGITVASLRPASGLAFSLPKRR 60

Query: 61  TSTDITLFTRQLATLLKAGIPLLQAFDIIAEGFDNRALRERVQGLKQAIEAGTSLAEALR 120
              D   F+RQLATLLKAG+PLLQAF+++     + A    ++ LKQ + +G  LA+AL+
Sbjct: 61  EKADPAGFSRQLATLLKAGVPLLQAFEVMGRSGCDAAQAALLERLKQDVASGLGLADALQ 120

Query: 121 KQPRCFDELYCNLVAAGEQAGALETLLERVAIHREKSEQLKTRIKKAMTYPITVLVVASL 180
           + P  FD LYCNLV  GEQ+G L+  LE++A   E+   L  +++KAM YP+ +L+    
Sbjct: 121 RHPAWFDALYCNLVRVGEQSGTLDRQLEQLAGMLEQRRVLHKKVRKAMIYPLLLLLTGLG 180

Query: 181 VTGVLLVHVVPQFQNLFAGVDGKLPGFTLQVIGLSEFMQKAWWAVALGGLAGGLGLREAY 240
           V+ +LL+ V+P+F+++F+G+   LP FT  VI LS  + +    + + G+  G+ +R+ Y
Sbjct: 181 VSAILLLEVIPKFESMFSGMGAALPAFTQWVINLSTGLSRFAPLLLVMGVVMGVAVRQLY 240

Query: 241 RRLADFRLWLDSCLLKAPVAGKLLSKSAVARFARTLSTTFAAGVPLLQALDSVAGAAGSG 300
           R+ A  RLW+   +L  PV GKLL ++A+ARFAR+L+T++ AGVPLL AL +VA   G  
Sbjct: 241 RQHAPARLWISRRVLGLPVFGKLLGQAALARFARSLATSYGAGVPLLDALGTVARVTGGD 300

Query: 301 PFRRAIEQMRRDVATGMPLNQSMLTSGLFPGMAIQMTAIGEESGTLDRMLEKVANHYEAD 360
              +A+ ++R+ +A G  LNQ+M    LFP + +Q+TAIGE SGTLD+MLEK A+HYE  
Sbjct: 301 LHEQAVLRLRQGMANGQGLNQAMAGEPLFPPLLVQLTAIGESSGTLDQMLEKAASHYEEQ 360

Query: 361 VDNLVDHLTHLMEPLIMVVLGGIVGALVIAMYLPVFQLGS 400
           V   +D LT L+EP I+++LG +VG LV+AMYLP+FQLGS
Sbjct: 361 VSQALDQLTSLLEPAIVLILGLLVGGLVVAMYLPIFQLGS 400