Pairwise Alignments

Query, 320 a.a., ribosomal large subunit pseudouridine synthase D from Pseudomonas simiae WCS417

Subject, 324 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Rhodanobacter sp000427505 FW510-R12

 Score =  323 bits (827), Expect = 5e-93
 Identities = 167/312 (53%), Positives = 216/312 (69%), Gaps = 2/312 (0%)

Query: 5   IELRAEVPSELGGQRLDQVAAQLFAEHSRSRLSAWIKDGRLTVDGAVIRPRDIVHGGAIL 64
           I   AEVP    G+R DQ  A++F ++SRSRLS WIK G +T+DGA   PR ++ GG  +
Sbjct: 4   IRHEAEVPLGAAGRRFDQALAEMFPDYSRSRLSGWIKSGAVTLDGAPAPPRQLLRGGERV 63

Query: 65  ELTAEQEAQGEWVAQDIELDIVYEDDDILVINKPAGLVVHPAAGHADGTLLNALLHHVPD 124
           +L  E E +    A+DI L IV+ED+ +LV++KPAGLVVHP AG+  GTLLNALLHH P 
Sbjct: 64  QLRVELENEVASAAEDIALAIVHEDEHLLVLDKPAGLVVHPGAGNPAGTLLNALLHHDPR 123

Query: 125 IINVPRCGIVHRLDKDTTGLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIGVVVAGGKI 184
           +  +PR GIVHRLDKDT+GLMVVA+T+   T LV  L    V R YE +V+G +VAGG +
Sbjct: 124 LAELPRAGIVHRLDKDTSGLMVVARTLPTYTALVDLLSRHEVERQYEAVVLGTLVAGGTV 183

Query: 185 NAPIGRHGQQRQRMAVM--EGGKQAVSHYRVLERFRSHTHVRVKLETGRTHQIRVHMAHI 242
           +APIGR    R R AV   E GK+AV+HYRV ERFR+H+ ++ +LETGRTHQIRVH+AHI
Sbjct: 184 DAPIGRSLGDRLRQAVRDEEDGKRAVTHYRVRERFRAHSLLQCRLETGRTHQIRVHLAHI 243

Query: 243 NFPLVGDPAYGGRFRIPPAASATMVDSLKNFPRQALHARFLELDHPTSGKRMSWESPLPD 302
           + PLVGDP YGG  ++P  ASA +  +L+ F RQALHA  L   HP +G+ MS+ +  P 
Sbjct: 244 SHPLVGDPLYGGGLKLPKGASAELAAALRGFRRQALHAEQLAFIHPATGEAMSFGAERPA 303

Query: 303 DLVWLLSLLKQD 314
           D   L+  L+ D
Sbjct: 304 DQQRLIETLRAD 315