Pairwise Alignments

Query, 320 a.a., ribosomal large subunit pseudouridine synthase D from Pseudomonas simiae WCS417

Subject, 319 a.a., 23S rRNA pseudouridylate synthase from Pseudomonas simiae WCS417

 Score =  111 bits (278), Expect = 2e-29
 Identities = 82/255 (32%), Positives = 128/255 (50%), Gaps = 15/255 (5%)

Query: 10  EVPSELGGQRLDQVAAQLFAEHSRSRLSAWIKDGRLTVDGAVIRPRDIVHGGAILELTA- 68
           EV  E  GQR+D           ++ +   ++ G + V+   I+P   +  G I+ +   
Sbjct: 15  EVSPEYAGQRIDNFLLARLKGVPKTLIYRILRKGEVRVNKGRIKPEYKLQAGDIVRVPPV 74

Query: 69  ------EQEAQGEWVAQDIELDIVYEDDDILVINKPAGLVVHPAAGHADGTLLNALLHHV 122
                 E     + + Q +E  I++ED+ ++VINKP G+ VH  +G   G ++ A     
Sbjct: 75  RVPERDEPVPLAQGLLQRLEASIIFEDNKLIVINKPCGIAVHGGSGLNFG-VIEAFRQLR 133

Query: 123 PDIINVPRCGIVHRLDKDTTGLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIGVVVAGG 182
           PD   +    +VHRLD+DT+GL+++AK       L T L+   V + Y  +V G   +  
Sbjct: 134 PDAKELE---LVHRLDRDTSGLLMIAKKRSMLRHLHTALRGDGVDKRYMALVRGNWASSI 190

Query: 183 K-INAPIGRHG-QQRQRMA-VMEGGKQAVSHYRVLERFRSH-THVRVKLETGRTHQIRVH 238
           K + AP+ +   +  +RM  V E GK+A++ ++VL RF    T V  K  TGRTHQIRVH
Sbjct: 191 KSVRAPLQKSNLRSGERMVEVDEEGKEALTLFKVLRRFGDFATMVEAKPVTGRTHQIRVH 250

Query: 239 MAHINFPLVGDPAYG 253
             H    + GD  YG
Sbjct: 251 TLHAGHCIAGDTKYG 265