Pairwise Alignments

Query, 320 a.a., ribosomal large subunit pseudouridine synthase D from Pseudomonas simiae WCS417

Subject, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

 Score =  110 bits (275), Expect = 3e-29
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 18/221 (8%)

Query: 83  LDIVYEDDDILVINKPAGLVVHPAAGHADGTLLNALLHHVPDIINVPRCGIVHRLDKDTT 142
           + I+Y+DD +LV+NKP  L+  P  G AD    + L+  + +    P   IVHRLD +T+
Sbjct: 6   IHILYQDDAVLVVNKPTLLLSVP--GRADDNK-DCLITRLQEN-GYPEARIVHRLDWETS 61

Query: 143 GLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIGVV-VAGGKINAPIGRHGQQRQRMAV- 200
           G++++A+      +L  Q   R   + Y  +  G   +  G I+ P+      + R  V 
Sbjct: 62  GIILLARDADTHRELSRQFHDRETEKAYTALAWGQPELDSGSIDLPLRYDPPTKPRHVVD 121

Query: 201 MEGGKQAVSHYRVLERFRSHTHVRVKLETGRTHQIRVHMAHINFPLVGDPAYGGRFRIPP 260
            E GK A++ ++VLER      V +   TGR+HQ+RVHM  I  PL+GD  Y        
Sbjct: 122 HEFGKHALTFWKVLERCGDWCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAHE----- 176

Query: 261 AASATMVDSLKNFPRQALHARFLELDHPTSGKRMSWESPLP 301
                   +L  +PR  LHA  L   HP SG+R+ +E P P
Sbjct: 177 -------QALAAWPRLCLHASMLSFTHPQSGERLRFECPAP 210