Pairwise Alignments

Query, 320 a.a., ribosomal large subunit pseudouridine synthase D from Pseudomonas simiae WCS417

Subject, 332 a.a., LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) from Variovorax sp. SCN45

 Score =  192 bits (489), Expect = 7e-54
 Identities = 133/309 (43%), Positives = 172/309 (55%), Gaps = 27/309 (8%)

Query: 11  VPSELGGQRLDQVAAQLFAEHSRSRLSAWIKDGRLTVDGAVIRPRDI-VHGGAI--LELT 67
           + S   GQRLD+  A L  E SRS L   I+ G + + G  +      V  G    +EL 
Sbjct: 30  IDSAQHGQRLDRALAALVPEFSRSYLQQLIEAGAVELQGRTVTKVSAGVKAGQAGRIELR 89

Query: 68  AEQEAQGEWVAQDIELDIVYEDDDILVINKPAGLVVHPAAGHADGTLLNALLHHVPDIIN 127
              ++Q  +  + ++L  VYED+ + +++KPAGLVVHPA GH  GTLLN LL   P    
Sbjct: 90  PTPQSQA-FRPETMDLVTVYEDEHLRIVDKPAGLVVHPAPGHWSGTLLNGLLALDPKAAL 148

Query: 128 VPRCGIVHRLDKDTTGLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIG----VVVAGGK 183
           +PR GIVHRLD+DT+GLMVVA+T      +V  + +R V R Y  + IG    V  A  +
Sbjct: 149 LPRAGIVHRLDRDTSGLMVVARTRATMDAMVALIAAREVKRQY--LAIGHKPWVGAAARQ 206

Query: 184 INAPIGRHGQQRQRMAVMEGGKQAVSHYRVL-ERFRSHTH---VRVKLETGRTHQIRVHM 239
           ++APIGR  + R RMAV++  + A    R L ER  SH+    VR  LETGRTHQIRVHM
Sbjct: 207 VDAPIGRDPRNRLRMAVVDLERHAGKTARTLIERLDSHSEGCVVRCTLETGRTHQIRVHM 266

Query: 240 AHINFPLVGDPAYGGRFRIPPAASATMVDSLKNFPRQALHARFLELDHPTSGKRMSWESP 299
           A I  PLVGD  YGG     PA   +         RQALHA  L   HP + + M + SP
Sbjct: 267 ASIGHPLVGDALYGG----APAVGLS---------RQALHAFRLAFVHPVTQEPMEFRSP 313

Query: 300 LPDDLVWLL 308
            P DL+  L
Sbjct: 314 PPPDLIQAL 322