Pairwise Alignments

Query, 320 a.a., ribosomal large subunit pseudouridine synthase D from Pseudomonas simiae WCS417

Subject, 320 a.a., 23S rRNA pseudouridine(1911,1915,1917) synthase from Pseudomonas putida KT2440

 Score =  546 bits (1406), Expect = e-160
 Identities = 267/320 (83%), Positives = 293/320 (91%)

Query: 1   MSDKIELRAEVPSELGGQRLDQVAAQLFAEHSRSRLSAWIKDGRLTVDGAVIRPRDIVHG 60
           MS+ I+L AEVPSELGGQRLDQVAAQLFAE+SRSRL++WIK+GRLTVDGAV+RPRD+VHG
Sbjct: 1   MSEIIQLSAEVPSELGGQRLDQVAAQLFAEYSRSRLTSWIKEGRLTVDGAVVRPRDLVHG 60

Query: 61  GAILELTAEQEAQGEWVAQDIELDIVYEDDDILVINKPAGLVVHPAAGHADGTLLNALLH 120
           G+ L L AEQEAQGEW+A+DIELDIVYEDD ILVINKPAGLVVHPAAGHA GTLLNALLH
Sbjct: 61  GSQLALEAEQEAQGEWIAEDIELDIVYEDDHILVINKPAGLVVHPAAGHASGTLLNALLH 120

Query: 121 HVPDIINVPRCGIVHRLDKDTTGLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIGVVVA 180
           HVPDI+NVPR GIVHRLDKDTTGLMVVAKT+QAQT+LV Q+Q+R VSRIYECIVIGVV A
Sbjct: 121 HVPDIVNVPRAGIVHRLDKDTTGLMVVAKTLQAQTKLVEQMQARKVSRIYECIVIGVVTA 180

Query: 181 GGKINAPIGRHGQQRQRMAVMEGGKQAVSHYRVLERFRSHTHVRVKLETGRTHQIRVHMA 240
           GGKI+APIGRHG  RQRMAV +GGK AVSHYRVL+RFRSHTHVRVKLETGRTHQIRVHMA
Sbjct: 181 GGKIDAPIGRHGGMRQRMAVTDGGKPAVSHYRVLKRFRSHTHVRVKLETGRTHQIRVHMA 240

Query: 241 HINFPLVGDPAYGGRFRIPPAASATMVDSLKNFPRQALHARFLELDHPTSGKRMSWESPL 300
           H+ FPLVGD  YGGRFRIPPAAS TMV+++K FPRQALHARFL L HP +G+ M WESPL
Sbjct: 241 HVGFPLVGDQTYGGRFRIPPAASPTMVEAVKTFPRQALHARFLALAHPITGEVMKWESPL 300

Query: 301 PDDLVWLLSLLKQDREAFIG 320
           PDD VWLLSLL QDRE+FIG
Sbjct: 301 PDDFVWLLSLLNQDRESFIG 320