Pairwise Alignments

Query, 320 a.a., ribosomal large subunit pseudouridine synthase D from Pseudomonas simiae WCS417

Subject, 339 a.a., RluA family pseudouridine synthase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  179 bits (453), Expect = 1e-49
 Identities = 117/310 (37%), Positives = 165/310 (53%), Gaps = 18/310 (5%)

Query: 10  EVPSELGGQRLDQVAAQLFAEHSRSRLSAWIKDGRLTVDGAVIRPRDIVHGGAILELTAE 69
           E   +  G RLD+  A  F   SR+RL A + +G ++ DGAV+          +  +   
Sbjct: 23  EARIDAAGARLDKALAGAFPTLSRARLQALLAEGAVSRDGAVLTGGSAKAQPGLYAVALP 82

Query: 70  QEAQGEWVAQDIELDIVYEDDDILVINKPAGLVVHPAAGHADGTLLNALLHHVPDIIN-- 127
             A      Q I L ++YED D++VI+KPAG+  HPA G  DGTL+NALL H  D ++  
Sbjct: 83  PVAPATPQPQAIPLTVLYEDADLIVIDKPAGMAAHPAPGTPDGTLVNALLAHCGDSLSGI 142

Query: 128 --VPRCGIVHRLDKDTTGLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIGV-VVAGGKI 184
             V R GIVHRLDKDT+G+MV AKT +A   L     +  + R Y  +  G    A G+I
Sbjct: 143 GGVARPGIVHRLDKDTSGVMVAAKTDRAHAGLSALFAAHDIERTYIALTRGAPSPATGRI 202

Query: 185 NAPIGRHGQQRQRMAVME-GGKQAVSHYRVLERFRS---------HTHVRVKLETGRTHQ 234
           +  IGR    R++MAV++ GG++A++ Y V   F              V   L TGRTHQ
Sbjct: 203 HTRIGRSTGDRKKMAVLKAGGREAITDYVVQATFGQPAKAGGAPMAARVACTLHTGRTHQ 262

Query: 235 IRVHMAHINFPLVGDPAYGGRFRIPPAASATMVDSLKNFPRQALHARFLELDHPTSGKRM 294
           IRVH++    P++GD  YG      P  +A    +L+   RQALHA  L   HP +G+ +
Sbjct: 263 IRVHLSSKGAPILGDATYGSGSPAIPVRTAIAEAALE---RQALHAAVLGFVHPVTGEVL 319

Query: 295 SWESPLPDDL 304
            +E+  P D+
Sbjct: 320 RFETAPPYDM 329