Pairwise Alignments

Query, 320 a.a., ribosomal large subunit pseudouridine synthase D from Pseudomonas simiae WCS417

Subject, 327 a.a., Ribosomal large subunit pseudouridine synthase D from Alteromonas macleodii MIT1002

 Score =  351 bits (900), Expect = e-101
 Identities = 181/311 (58%), Positives = 227/311 (72%), Gaps = 1/311 (0%)

Query: 5   IELRAEVPSELGGQRLDQVAAQLFAEHSRSRLSAWIKDGRLTVDGAVIR-PRDIVHGGAI 63
           I+L A   +   G RLDQV A LF E+SRS+L  WI+DG + V+G VI  PR  +    +
Sbjct: 8   IQLEASTEAAHFGLRLDQVLADLFPEYSRSKLKTWIQDGNVAVNGEVITVPRHKMQMDEL 67

Query: 64  LELTAEQEAQGEWVAQDIELDIVYEDDDILVINKPAGLVVHPAAGHADGTLLNALLHHVP 123
           + + AE + Q    AQDI L+IVYED+ ILVINKPA LVVHP AG+  GT+LNALL+H P
Sbjct: 68  VTVQAEMDVQVTSEAQDIALNIVYEDEHILVINKPADLVVHPGAGNPSGTVLNALLNHCP 127

Query: 124 DIINVPRCGIVHRLDKDTTGLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIGVVVAGGK 183
           +I  VPR GIVHRLDKDTTGLMVVAKTI AQT LV QLQ R +SR YE + +G +VAGG 
Sbjct: 128 EIDKVPRAGIVHRLDKDTTGLMVVAKTIPAQTHLVDQLQRREMSREYEAVALGTMVAGGI 187

Query: 184 INAPIGRHGQQRQRMAVMEGGKQAVSHYRVLERFRSHTHVRVKLETGRTHQIRVHMAHIN 243
           ++APIGRH  +R  MAV E GK AV+H+RV+E+FR++TH+R+KLETGRTHQIRVHMAHI 
Sbjct: 188 VDAPIGRHATKRTHMAVREMGKPAVTHFRVIEKFRAYTHLRLKLETGRTHQIRVHMAHIK 247

Query: 244 FPLVGDPAYGGRFRIPPAASATMVDSLKNFPRQALHARFLELDHPTSGKRMSWESPLPDD 303
            PL+GD  YGGR R+P  AS   + +L+ F RQALHA  L L HP + + M+W++PLP D
Sbjct: 248 HPLLGDQVYGGRPRLPKGASEEFIAALRGFQRQALHAAQLSLFHPETEEWMTWKAPLPQD 307

Query: 304 LVWLLSLLKQD 314
           +  LL  +K+D
Sbjct: 308 MQDLLKAVKKD 318