Pairwise Alignments

Query, 320 a.a., ribosomal large subunit pseudouridine synthase D from Pseudomonas simiae WCS417

Subject, 221 a.a., Dual-specificity RNA pseudouridine synthase RluA from Acinetobacter radioresistens SK82

 Score =  109 bits (272), Expect = 7e-29
 Identities = 74/217 (34%), Positives = 108/217 (49%), Gaps = 32/217 (14%)

Query: 83  LDIVYEDDDILVINKPAGLVVHPAA--GHADGTLLNALLHHVPDIINVPRCGIVHRLDKD 140
           L I+YEDDD+++I+KPAGL+  P     H D   L  L  +       P   I HRLD  
Sbjct: 16  LSIIYEDDDLIIIDKPAGLLSVPGRLPEHQDSAYLRLLEKY-------PHAKITHRLDMA 68

Query: 141 TTGLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIGVVVAGGKINAPIGRHGQQRQRMAV 200
           T+G+++ AK   A+  +    Q+R+V++ Y  ++ G +   G I+ P+    + R R  V
Sbjct: 69  TSGILMFAKHRDAEVAISKMFQARTVTKRYVALIQGQLNEQGSIDVPLITDWENRPRQIV 128

Query: 201 -MEGGKQAVSHYRVLERFRSHTHVRVKLE--TGRTHQIRVHMAHINFPLVGDPAY----G 253
             E GK A + ++VL+    H   RV L   TGR+HQ+RVHM +I  P++GD  Y    G
Sbjct: 129 HFELGKSAKTLFQVLQYHEEHDMTRVLLTPITGRSHQLRVHMQYIGHPIMGDKLYHPEPG 188

Query: 254 GRFRIPPAASATMVDSLKNFPRQALHARFLELDHPTS 290
           G +                  R ALHA +L    P S
Sbjct: 189 GFY----------------LRRMALHASYLAFQQPLS 209