Pairwise Alignments

Query, 341 a.a., DNA transporter from Pseudomonas simiae WCS417

Subject, 288 a.a., outer membrane protein assembly factor BamD from Rhodanobacter sp000427505 FW510-R12

 Score =  219 bits (557), Expect = 9e-62
 Identities = 107/254 (42%), Positives = 166/254 (65%), Gaps = 4/254 (1%)

Query: 3   VKHLLLIAILAMTAACSSTKEVVD--ENLSEVELYQLAQKDLDNNSFTSATAKLKALESR 60
           +K L+++A++   +ACS  K   D  + +  V LY  A   L N  + +AT   + L +R
Sbjct: 18  LKVLVVLALVVSMSACSMFKSKRDTIDTMPLVALYDNAHASLQNTDYAAATKAYQRLIAR 77

Query: 61  YPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDV 120
           +P G Y +QAQLE+ YA YK+ +P+ A S   RFI+ +P + +VDYAYY++GL +FD+  
Sbjct: 78  FPSGEYNEQAQLEMAYAQYKDNQPDDASSTVNRFIKTYPANKHVDYAYYLRGLINFDRTS 137

Query: 121 GLLARFLPL--DMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEI 178
           G++ R++       +RD G    S+++F++L+ R+P+S Y  DA+QRMIYLRN+LA YEI
Sbjct: 138 GMIDRYINRKGSQARRDQGYNLQSFDDFSELSRRFPDSAYTADARQRMIYLRNILAQYEI 197

Query: 179 HVAHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETLK 238
           +VA +YL  +AY+AAA+R +YV+E++Q+ P  GD LA+++ +Y  L    LA  S + L 
Sbjct: 198 NVAEFYLRNKAYIAAADRAQYVIEHYQQAPQTGDALAILSRSYLALDQKTLADQSRQVLA 257

Query: 239 LNYPDHPSLKDGQF 252
           LNYP HP L D ++
Sbjct: 258 LNYPGHPYLTDAKW 271