Pairwise Alignments

Query, 341 a.a., DNA transporter from Pseudomonas simiae WCS417

Subject, 339 a.a., Outer membrane protein assembly factor BamD from Pseudomonas putida KT2440

 Score =  576 bits (1485), Expect = e-169
 Identities = 285/341 (83%), Positives = 309/341 (90%), Gaps = 2/341 (0%)

Query: 1   MQVKHLLLIAILAMTAACSSTKEVVDENLSEVELYQLAQKDLDNNSFTSATAKLKALESR 60
           M+VKHLLLIAIL +TAACSS KEV+DENLSE ELYQ AQ DLDN+S+TSA  KLKALESR
Sbjct: 1   MRVKHLLLIAILGLTAACSSNKEVIDENLSEAELYQQAQADLDNSSYTSAVNKLKALESR 60

Query: 61  YPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDV 120
           YPFGRYADQAQLELIYANYKN+EPEAAKSAAERFIRLHPQHPNVDYAYY+KGLTSFDQD 
Sbjct: 61  YPFGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDR 120

Query: 121 GLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIHV 180
           GLLARFLPLDMTKRDPGAARDSYNEFAQLTSR+PNSRYAPDAKQRMIYLRNLLASYEIHV
Sbjct: 121 GLLARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHV 180

Query: 181 AHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETLKLN 240
           A YYL+RQAYVAAANRGRYVVENFQETPSVGDGLAVM E+YQ+LHLDELA+TSLETLKLN
Sbjct: 181 ADYYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSLETLKLN 240

Query: 241 YPDHPSLKDGQFVPQVAEADNRSWLSKYTLGLIESRPPLPPGETRANQDVIKQYQDAKDA 300
           YPDHPSL DG+F P+  E+D R WLSK TLGLIE+  PLPPGETRANQDV+KQ+QDA+D 
Sbjct: 241 YPDHPSLVDGEFQPKQTESDGRGWLSKATLGLIETETPLPPGETRANQDVVKQFQDARDE 300

Query: 301 IPSDLKPHDENGDVIEEEEPQALGNNQDRSWFSYMTFGVFD 341
           +P +L P DENGD I  E P+     +DRSWFSYMTFG+FD
Sbjct: 301 MPRELLPKDENGDPIVPEGPKEA--EKDRSWFSYMTFGLFD 339