Pairwise Alignments

Query, 341 a.a., DNA transporter from Pseudomonas simiae WCS417

Subject, 244 a.a., outer membrane protein assembly factor BamD from Dickeya dianthicola ME23

 Score =  196 bits (499), Expect = 4e-55
 Identities = 101/226 (44%), Positives = 148/226 (65%), Gaps = 2/226 (0%)

Query: 2   QVKHLLLIAILAMT-AACSSTKEVVDENLSEVELYQLAQKDLDNNSFTSATAKLKALESR 60
           ++K+L+  A L++T A CS++K+ V +     ELY  AQ+ L + +F +A  +L+AL++R
Sbjct: 3   RMKYLVAAATLSLTLAGCSNSKDAVPDRPPS-ELYATAQEKLQDGNFKAAITQLEALDNR 61

Query: 61  YPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDV 120
           YPFG YA Q QL+LIYA YK+AE   A+++ +RFIRL+P HPNVDY  YM+GLT+  QD 
Sbjct: 62  YPFGPYAQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRGLTNMAQDD 121

Query: 121 GLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIHV 180
             L  F  +D + RDP  AR ++  F+QL   YPNS+YA D  +R+ +L+  LA YE+ V
Sbjct: 122 SALQGFFGVDRSDRDPQYARSAFKAFSQLLQGYPNSQYATDTSKRLAFLKERLAKYELSV 181

Query: 181 AHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHL 226
           A YY  R AYVA  NR   +++++ +T +    L +M  AY+ L L
Sbjct: 182 AQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELQL 227