Pairwise Alignments

Query, 193 a.a., general secretion pathway protein GspH from Pseudomonas simiae WCS417

Subject, 160 a.a., putative Type IV pili biogenesis protein FimT from Pseudomonas putida KT2440

 Score =  100 bits (248), Expect = 2e-26
 Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 10/170 (5%)

Query: 1   MRQQGFTLIELLLGLIVSGILAGLATPGFKGLLDSQQRHGAAQSLTAGLRYARTEAIARN 60
           M+Q+G TLI++L  L V+ +L  L  P +  + D   R  AA+ L   LR AR+ A+ + 
Sbjct: 1   MKQRGVTLIQMLSALAVAVLLTQLGMPAYARMSDDLHRAAAARDLAQALRSARSHALLQG 60

Query: 61  QAVVIHARENSWSQGWRVIVDASGRGHLDDDNPVLREHQDNGGVTIVGNGPVKNQVRFSG 120
           Q V++ A + +W  GWRV+        L+ +  VLRE + +  + I  N     Q +FS 
Sbjct: 61  QPVLVLALDGNWGNGWRVV--------LEHNRQVLREQRLSKPLKITSNR--GEQFKFSA 110

Query: 121 LGEPVFSGGGFRAGTVHVCATDLAQSLYQVVLAPSGRISLRSERAEQALC 170
           LG P+ SG  +    + +C    A+S YQVVLA SGR+ L +E      C
Sbjct: 111 LGVPMTSGNSWLGAKLEMCERAAARSRYQVVLASSGRVRLLTEDLSNDRC 160