Pairwise Alignments

Query, 512 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 512 a.a., putative lipid II flippase MurJ from Xanthobacter sp. DMC5

 Score =  173 bits (439), Expect = 1e-47
 Identities = 164/512 (32%), Positives = 238/512 (46%), Gaps = 39/512 (7%)

Query: 1   MNLLKSLAAVSSITMISRVLGFVRDTLLARIFGASMATDAFFIAFKLPNLLRRIFAEGAF 60
           M+LL   + VS+ T++SRVLGF RD   A + G     DA   A  LP L RR+ AEGAF
Sbjct: 1   MSLLARTSIVSAATLVSRVLGFARDAATAAVLGVGPVADALAAAMALPLLARRLLAEGAF 60

Query: 61  SQAFVPILAEYKTQQG---EEATRTFIAYVSGLLTLVLMLVTLLGMLAAPWVIWATAPGF 117
           + AF+P LA      G   EEA R   A +  L  L+L+   ++ +   P VI   APGF
Sbjct: 61  NLAFIPALARTSGAAGSRDEEAGRLAGATLLLLCGLLLVFAAVVAVF-MPQVIGLMAPGF 119

Query: 118 ANTPEKFALTTDLLRVTFPYILLISLSSLAGAILNTWNRFSVPAFVPTLLNVSMI-IFAL 176
               ++  +     RV   YI L  L+++ G I N  +R  +PA  P   NV+++ +  +
Sbjct: 120 EAGGQRADVAILCGRVVVLYIPLAGLAAIFGGIANAAHRVLLPALAPAAANVTVLAVIGV 179

Query: 177 FLTPYF---DPPVMALGWAVLAGGLAQLLYQLPHLKKIGMLVLPR---LNLKD-TGVWRV 229
            L       D    A+  A +  G AQ  + +  L   G    P    L ++D      V
Sbjct: 180 LLAKGLMESDTAAFAIAAAQVGAGCAQ--FGIMRLAARGCPAQPLFRVLTVRDLRAALGV 237

Query: 230 MRNMLPAILGVSVSQISLIINTAFASLLVSGSVSWMYYADRLMELPSGVLGVALGTILLP 289
           +R   PA+L   +SQ+  II  A  S    G+ + + YA RLM+LP G++G + G +L+P
Sbjct: 238 LRAASPALLFAGLSQLRFIIVVAAVS-ATPGAAAALNYAQRLMDLPLGLVGASAGAVLVP 296

Query: 290 TLARTYASKDRQEYSRILDWGLRLCFVLVLPCALALGILAEPLTVALFQYGQFDAHDALM 349
            L R    + R E +      +       LP A+ L +LAEP+ V LFQ G FD+ DA  
Sbjct: 297 ALLR----RGRAEAADDAGRAVLAALAFALPAAVGLAVLAEPIVVTLFQRGSFDSEDARF 352

Query: 350 TQHALIAYSVGLLGIIVIKVLAPGFYAQQNIRTPVKIAIFTLIVTQLLNL---VFIGPLA 406
           T   L   S+ L    + ++L+        I+   +IA+ +L++  +         GPL 
Sbjct: 353 TAALLGVLSLSLPAQGLERILSAAASTSGQIKAAERIALGSLLLCMVAAAGLGTVGGPLI 412

Query: 407 HAGLALAISAGACINA--GLLFYQLRKQQMFQPQPGWGLFALKLLVAVGVMSAVLL---G 461
            AG A+A+SA A I A  G+L                   A  LL A G+ +A L    G
Sbjct: 413 AAG-AVALSAVASILALGGVLI----------ASGALRFSAPVLLSAAGLAAASLAMGGG 461

Query: 462 LMHFMPAWD-EGHMLERFLRLGVLVVAGVVVY 492
           +      W   G  L   LRL  LV +G V+Y
Sbjct: 462 VGVLAATWPVPGGTLAGILRLVGLVASGGVIY 493