Pairwise Alignments

Query, 512 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 524 a.a., Peptidoglycan lipid II flippase MurJ from Sphingobium sp. HT1-2

 Score =  317 bits (811), Expect = 9e-91
 Identities = 197/515 (38%), Positives = 295/515 (57%), Gaps = 12/515 (2%)

Query: 1   MNLLKSLAAVSSITMISRVLGFVRDTLLARIFGASMATDAFF-IAFKLPNLLRRIFAEGA 59
           M L+K+L +V  +T+ SRVL  VRD+L AR  GA  A+DAF  +AF+LPN+ R +FAEGA
Sbjct: 1   MKLVKALGSVGGLTLASRVLALVRDSLAARYVGAGFASDAFNGVAFRLPNMFRALFAEGA 60

Query: 60  FSQAFVPILAEYKTQQGEEATRTFIAYVSGLLTLVLMLVTLLGMLAAPWVI-WATAPGFA 118
           FS AF+P+  +     G  A     A  +  + L ++++  + +LAA W I WA + GF+
Sbjct: 61  FSAAFIPLFNKKAAGPGGMADGYHFAERALAVLLPVLILFTIVLLAAAWPITWALSGGFS 120

Query: 119 N---TPEKFALTTDLLRVTFPYILLISLSSLAGAILNTWNRFSVPAFVPTLLNVSMIIFA 175
               TP++FA    L R+T PY+ LISL+SL G ILN+ ++F V A  P LLNV+MI   
Sbjct: 121 RQNPTPDQFAFAVTLSRITIPYLALISLASLLGGILNSLDKFWVNAAAPILLNVAMIAGL 180

Query: 176 LFL---TPYFDPPVMALGWAVLAGGLAQLLYQLPHLKKIGMLVLPRLNLKDTGVWRVMRN 232
            F      Y    V A+  +V  GG  QLL+ +   K+ G+ +  +    D  V  ++R 
Sbjct: 181 WFFHGADEYETARVQAM--SVTVGGALQLLWLIWACKRAGVSMKLKRPRLDADVRELLRL 238

Query: 233 MLPAILGVSVSQISLIINTAFAS-LLVSGSVSWMYYADRLMELPSGVLGVALGTILLPTL 291
           ++PA  G   SQI+L+I+TA +  LL SGS++++YYADRL +LP G++G+ LGTILLPT+
Sbjct: 239 IVPAAAGAGASQINLLISTALSGWLLASGSITYIYYADRLNQLPLGLIGIGLGTILLPTI 298

Query: 292 ARTYASKDRQEYSRILDWGLRLCFVLVLPCALALGILAEPLTVALFQYGQFDAHDALMTQ 351
           +R  +  + Q      + G+ L   L LP  +A   +AEP+   LFQYG+F A DA+   
Sbjct: 299 SRMLSKGEDQAAMETQNRGIELALFLTLPATVAFITVAEPIVRGLFQYGRFSAEDAMRCG 358

Query: 352 HALIAYSVGLLGIIVIKVLAPGFYAQQNIRTPVKIAIFTLIVTQLLNLVFIGPLAHAGLA 411
            AL A+S+GL   +++KVL PG+YA+ + +TPV+ A+ ++ +  + NL  I  L H G  
Sbjct: 359 WALSAFSIGLPSYVLVKVLTPGYYARGDTKTPVRYAMLSIAINIVGNLAMIPTLGHIGPP 418

Query: 412 LAISAGACINAGLLFYQLRKQQMFQPQPGWGLFALKLLVAVGVMSAVLLGLMHFMPAWDE 471
           LA +  + +N  +L+  L  +  F   P       +L VA  VM   L      +     
Sbjct: 419 LATALSSTVNVAMLYRTLVARGHFTADPQLRRRIPRLAVAAVVMGVALWAGEDLLDPMLS 478

Query: 472 GHMLERFLRLGVLVVAGVVVY-FGMLLAQGFRLRD 505
           G M+ R++ L +LV AGV +Y     +   +RL D
Sbjct: 479 GPMVGRYIGLALLVGAGVALYGLACFVTGAYRLSD 513