Pairwise Alignments

Query, 574 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 582 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 74.7 bits (182), Expect = 9e-18
 Identities = 103/488 (21%), Positives = 188/488 (38%), Gaps = 50/488 (10%)

Query: 128 LARAGRYDDSMIYMEKVLQGKGDTHFDFLALSAADTDQDTRDGLMKSFDRLLQKHPKNSQ 187
           LARA + + ++ + +K ++   +  +  L ++   T Q+  +   +  + L++    N Q
Sbjct: 90  LARANQNEKALEHGQKAVEADPENKYYHLLIAEVYTKQNQPEKAAEILETLIESSDDNKQ 149

Query: 188 LIFGKALLLQQDDEADAALKLLEQNPPEEGEIAPILL-RARLLQNLNRGKEAIPLLEKSI 246
            I   A L     + D AL  L++     G +  + + + R+    N    AI   EK I
Sbjct: 150 YILELASLYLSTQQFDKALIALDKAEEYYGVVEQLSVQKQRIYLKQNNLDAAIKEGEKLI 209

Query: 247 KKYPEDKRLRLTYARMLVEQDRMEDAKVQFASLVQQYPDDDELRYSLALVCLEAKAWDEA 306
           +  P + R  L    ML   +R++ A     + ++ YP+  +L  +   +  + +A D A
Sbjct: 210 QANPGNSRYVLALVEMLFNNNRIDQALGVVNASLEDYPNQPDLHLAAYTLYKKKEALDVA 269

Query: 307 KGYLEELIQ-------------------------RESHVDSAHLN--------------L 327
             +L    Q                         RES +DS                  L
Sbjct: 270 HDHLFTAFQSPDLEGEIKAQTFGDIMQKDLKTKERESMLDSLETLMVKTSPKSAPVWTIL 329

Query: 328 GRIAEERNDPQAALLEYAQVGPGNDYLPAQLRQADILM-SNGRTDEAEKRLAAARDAEPD 386
           G  A +   P  AL  Y Q    N   P  L+    LM   G+  E  +   A    E  
Sbjct: 330 GDRAMQNQQPAKALENYQQSIAINPQDPKVLQGVISLMFEQGKDFEEIETYTALGTEEFP 389

Query: 387 YAIQLYLIQAETLSANNQSERAWKLLQQALLQFPDDLNLLYTRAMQAEKRNDLAQMEKDL 446
              + +        A  + E A   L+Q+L +  D  N      +  +  +    ++K+ 
Sbjct: 390 QKPEFWFFDGTAKLAIKKHEAAATSLKQSL-ELNDGTNKQLDLMVLGQLGDTYHALKKED 448

Query: 447 RL------IIKRDPDNAMALNALGYTLSDRTTRYAEAKVLIEQAHKLNPEDPAVLDSLGW 500
           +       +++  P++   LN   Y LS       +A  +  +  +  P++   LD+  W
Sbjct: 449 KAFEAYDKVLEISPEDEHVLNNYAYFLSLEKRDLDKALDMSSKLVRRFPDNATYLDTHAW 508

Query: 501 VNYRLGNLDEAERLLRQA--LERFPDQEVAAHLGEVLWANGKQREARQIWEKFLKEQPES 558
           V ++  +  EAE+ +++A  LE  P   +  H G++L+  G +  A + WEK   +   S
Sbjct: 509 VLFQKKSYQEAEKYMKKALELEESPSGVMLEHYGDILFHLGDKSGALEYWEKAAGKSDVS 568

Query: 559 PILRGTIK 566
             L   IK
Sbjct: 569 EELDQKIK 576



 Score = 34.7 bits (78), Expect = 1e-05
 Identities = 49/214 (22%), Positives = 94/214 (43%), Gaps = 11/214 (5%)

Query: 359 RQADILMSNGRTDEAEKRLAAARDAEPDYAIQLYLIQAETLSANNQSERAWKLLQQALLQ 418
           + A+IL    + ++A +    A +A+P+     +L+ AE  +  NQ E+A ++L + L++
Sbjct: 85  KMAEILARANQNEKALEHGQKAVEADPENKYY-HLLIAEVYTKQNQPEKAAEIL-ETLIE 142

Query: 419 FPDDLNLLYTRAMQAEKRNDLAQMEKDLRLIIKRDPDNAMALNALGYTLSDRTTRYAEAK 478
             DD N  Y   + A       Q +K L + + +  +    +  L         +     
Sbjct: 143 SSDD-NKQYILEL-ASLYLSTQQFDKAL-IALDKAEEYYGVVEQLSVQKQRIYLKQNNLD 199

Query: 479 VLIEQAHKL---NPEDPAVLDSLGWVNYRLGNLDEAERLLRQALERFPDQEVAAHLGEVL 535
             I++  KL   NP +   + +L  + +    +D+A  ++  +LE +P+Q         L
Sbjct: 200 AAIKEGEKLIQANPGNSRYVLALVEMLFNNNRIDQALGVVNASLEDYPNQPDLHLAAYTL 259

Query: 536 WANGKQREARQIWEKFLKEQPESPILRGTIKRLT 569
           +   K++EA  +    L    +SP L G IK  T
Sbjct: 260 Y---KKKEALDVAHDHLFTAFQSPDLEGEIKAQT 290



 Score = 26.2 bits (56), Expect = 0.004
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 474 YAEAKVLIEQAHKLNPEDPAVLDSLGWVNYRLGNLDEAERLLRQALERFPDQEVAAHL-- 531
           Y +A    ++AH L PE  AV   +  +  R    ++A    ++A+E  P+ +   HL  
Sbjct: 62  YEKAYFYFDKAHDLTPESGAVNFKMAEILARANQNEKALEHGQKAVEADPENKY-YHLLI 120

Query: 532 GEVLWANGKQREARQIWEKFLKEQPES 558
            EV     +  +A +I E  ++   ++
Sbjct: 121 AEVYTKQNQPEKAAEILETLIESSDDN 147