Pairwise Alignments

Query, 273 a.a., type III secretion protein from Pseudomonas simiae WCS417

Subject, 572 a.a., flagellar M-ring protein FliF from Rhodanobacter sp000427505 FW510-R12

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 15/161 (9%)

Query: 26  LHRQLTEQEANEVVAELADKHIRATKVP---AKDGVIVVVNATEIARAVRTLEAVGLPR- 81
           L+  L +++A+ +  EL     +A   P   + DG  ++  A ++A     L A GLP+ 
Sbjct: 59  LYAGLEQKDASAITQEL-----QANNTPYRLSSDGSSIMAPAADLAALRLKLAAKGLPQG 113

Query: 82  -AARTTLGNTFRKEGVISTPLEERARYIYALSQELETTLSNIDGVIVARVHVVLPERVAP 140
            A+ +TL       G+  + L ER RY   L  +L TT+  +  V  ARVH+ LP+  A 
Sbjct: 114 SASSSTLPAADSPFGM--SDLAERTRYQQLLEADLGTTIGGLQSVRAARVHLALPKPSAF 171

Query: 141 GEPVQPASASVFIKHDP--RLDPDSIRARVRRMVASSLPGM 179
               + ASASV +   P  +LD   + A V  +VA+S+P +
Sbjct: 172 IRDSREASASVLVTLYPGRQLDAGQVAAIV-HLVAASVPNL 211