Pairwise Alignments

Query, 273 a.a., type III secretion protein from Pseudomonas simiae WCS417

Subject, 592 a.a., flagellar M-ring protein FliF from Pseudomonas simiae WCS417

 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 26  LHRQLTEQEANEVVAELADKHIRATKVPAKDGVIVVVNATEIARAVRTLEAVGL-PRAAR 84
           L+  L   ++ +++  LA   I  T  P    ++V   A ++ARA   L A G+ P  + 
Sbjct: 65  LYGSLAGMDSKQIMETLAAADIAYTVEPNSGALLV--KADDVARARMKLAAAGVTPSDSN 122

Query: 85  TTLGNTFRKEGVISTPLEERARYIYALSQELETTLSNIDGVIVARVHVVLPERVAPGEPV 144
                  + +G+ ++   E  RY   L  EL  T+S+++ V  ARVH+ +P+        
Sbjct: 123 IGFEILDKDQGLGTSQFMEATRYRRGLEGELARTISSLNNVKGARVHLAIPKSSVFVRDE 182

Query: 145 QPASASVFIK--HDPRLDPDSIRARVRRMVASSLPGMA----TAVDNSQKL 189
           +  SASV ++      L+P  + A V  +VA+S+P ++    T VD    L
Sbjct: 183 RKPSASVLVELFAGRSLEPGQVLAIV-NLVATSVPELSKSQITVVDQKGNL 232