Pairwise Alignments

Query, 713 a.a., secretin from Pseudomonas simiae WCS417

Subject, 441 a.a., pilus assembly protein PilQ from Pseudomonas simiae WCS417

 Score = 82.4 bits (202), Expect = 4e-20
 Identities = 78/320 (24%), Positives = 136/320 (42%), Gaps = 37/320 (11%)

Query: 262 PLLSQMLDAN-GTTGQMAPM-PALTSRAPVSTSRIRVEADVRNNAVLIYDLPERQTMYRE 319
           PL  ++L  N      +A +  ++T    V+  R  V  D R N ++ Y   ER    R 
Sbjct: 122 PLRRELLQVNYAKAADLAKLFQSVTGLEGVTDERGSVAVDDRTNNIIAYQTVERLEELRR 181

Query: 320 LITQLDVARKLIEIDAIILDIERTQLREFGVNWGFQNSRFR---GGVNMAP--------- 367
           ++ QLD+  + + I+A I++      +  G  WG + +R     GG+   P         
Sbjct: 182 IVAQLDIPVRQVMIEARIVEANVDYDKSLGARWGGRLNRGNWGAGGIAKPPPEGAAPPEN 241

Query: 368 -------------GTSSQLSIDNRDRFYADIR--ALEAKGLATMVSNPSVLTLENQPA-V 411
                        GTS        D    D+   A+E  G   +VS P V+T + + A +
Sbjct: 242 PPPSPFVDLGSLTGTSGLGIAYITDNLLLDLELTAMEKTGNGEIVSQPKVVTSDKETARI 301

Query: 412 IDFNRTQYITPGRDYATILPVTVGT-SLQVVPRVTTGRGVHQIHLAVDIEDGNFDETNPD 470
           +      Y       AT +     + SL+V P++T      ++ + V +     D  N  
Sbjct: 302 LKGTEIPYQESSSSGATSVSFKEASLSLEVTPQITPD---DRVIMEVKVTKDEPDYLNKL 358

Query: 471 RDPNHPDVRRGKVSTQAVMQEKRSLVVGGFHVTDSSDQQKKIPLLGDIPLLGKALFSSTE 530
            D   P +++ +V+ + ++++  ++V+GG      S    K+P LGD+P LG+ LF    
Sbjct: 359 NDV--PPIKKNEVNAKVLVKDGETIVIGGVFSNTQSKVVDKVPFLGDVPYLGR-LFRRDV 415

Query: 531 RHNNRRERLFILTPRVIGDQ 550
               + E L  LTPR++ +Q
Sbjct: 416 LAEKKSELLVFLTPRIMNNQ 435