Pairwise Alignments

Query, 713 a.a., secretin from Pseudomonas simiae WCS417

Subject, 412 a.a., type 4 pili biogenesis protein from Pseudomonas putida KT2440

 Score = 87.0 bits (214), Expect = 2e-21
 Identities = 66/267 (24%), Positives = 125/267 (46%), Gaps = 18/267 (6%)

Query: 296 VEADVRNNAVLIYDLPERQTMYRELITQLDVARKLIEIDAIILDIERTQLREFGVNWG-- 353
           +  D R N ++++   +R    R+L+ QLDV  + + I+A I++      +  GV WG  
Sbjct: 146 LSVDERTNTLVVHLPADRLAEMRQLVAQLDVPVRQVAIEARIVEANVDYEKSLGVRWGGP 205

Query: 354 FQNSRFRGGVNM-------APGTSSQLSIDNRDRFY-ADIRALEAKGLATMVSNPSVLTL 405
               + R G  +         G+S  L +   D     ++ A+E  G   ++S P V+T 
Sbjct: 206 LYGEKLRPGKELFVDLGLERAGSSIGLGLLRGDVLLDLELSAMEKSGNGEIISQPKVVTA 265

Query: 406 ENQPA-VIDFNRTQYITPGRDYATILPVTVGT-SLQVVPRVTTGRGVHQIHLAVDIEDGN 463
           + + A ++      Y    +  AT +     + SL+V P++T     +++ + V +    
Sbjct: 266 DKETARILKGTEVPYQETSQSGATSVSFREASLSLEVTPQITPD---NKVIMTVRVTKDE 322

Query: 464 FDETNPDRDPNHPDVRRGKVSTQAVMQEKRSLVVGGFHVTDSSDQQKKIPLLGDIPLLGK 523
            D  N     N P +R+ +V+ +  + +  ++V+GG + T  ++   K+P  GD+P +G+
Sbjct: 323 PDYVNALN--NVPPIRKNEVNAKVRVADGETIVIGGVYSTSQNNVVDKVPFFGDLPYVGR 380

Query: 524 ALFSSTERHNNRRERLFILTPRVIGDQ 550
            LF        + E L  LTPR++ DQ
Sbjct: 381 -LFRRDALQEKKSELLVFLTPRIMSDQ 406