Pairwise Alignments

Query, 713 a.a., secretin from Pseudomonas simiae WCS417

Subject, 584 a.a., Type II secretion pathway protein XcpQ from Pseudomonas putida KT2440

 Score = 94.4 bits (233), Expect = 1e-23
 Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 46/318 (14%)

Query: 292 SRIRVEADVRNNAVLIYDLPERQTMYRELITQLDVARKLIEIDAIILDIERTQLREFGVN 351
           S IR+E +   NAV++         YR ++ QLD+ R  + ++AII ++  +  +E GV 
Sbjct: 249 SGIRLEYEEGTNAVVMVGPDSELAAYRAIVEQLDIRRAQVVVEAIIAEVSDSSAQELGVQ 308

Query: 352 WGFQNSRF--------RGGVNMAPGTSSQLSIDNRD----------------------RF 381
           W F + +F          GVN+A    +  S DN                         F
Sbjct: 309 WLFADEKFGAGIVNFGSNGVNIASIAGAAASGDNEALGDLLSTTTGATAGIGHFGGGFNF 368

Query: 382 YADIRALEAKGLATMVSNPSVLTLENQPAVIDFNRTQYITPG-------RDYATILPVTV 434
              + AL+ K    ++S P++LTL+N  A I   +      G         Y TI    V
Sbjct: 369 AMLVNALKGKSGFNLLSTPTLLTLDNAEASILVGQEVPFVTGSVTQNNANPYQTIERKEV 428

Query: 435 GTSLQVVPRVTTGRGVHQIHLAVDIEDGNFDETNPDRDPNHPDVRRGKVSTQAVMQEKRS 494
           G  L++ P++      + + L +  E  +  +T+   D       + ++ T+ ++++   
Sbjct: 429 GVKLRIKPQINID---NSVRLDIVQEVSSIADTSSASD---VITNKREIKTKVMVEDNGL 482

Query: 495 LVVGGFHVTDSSDQQKKIPLLGDIPLLGKALFSSTERHNNRRERLFILTPRVIGDQDDPS 554
           +++GG    + S   +++PLLGDIP LG+ LF S    N ++  +  + PR++  +D PS
Sbjct: 483 VILGGLISDELSTSDQRVPLLGDIPYLGR-LFRSDATRNTKQNLMVFIRPRIL--RDGPS 539

Query: 555 RYLPQDDQAELQAALAPL 572
                +D+        PL
Sbjct: 540 LAGLSEDKYRTLQQTTPL 557