Pairwise Alignments

Query, 713 a.a., secretin from Pseudomonas simiae WCS417

Subject, 389 a.a., Type IV pilus biogenesis protein PilQ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 78.2 bits (191), Expect = 7e-19
 Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 22/272 (8%)

Query: 296 VEADVRNNAVLIYDLPERQTMYRELITQLDVARKLIEIDAIILDIERTQLREFGVNWGFQ 355
           +  D R N +L+ D         + ++Q+D+    +E+ A I+ I    LRE GV W   
Sbjct: 123 IMVDKRTNRLLLRDNRAALAELEKWVSQMDLPVAQVELAAHIVTINEKSLRELGVKWTLA 182

Query: 356 NSRFRGGVNMAPGTSSQLSID-------------NRDRFYADIRALEAKGLATMVSNPSV 402
           ++   G V      SS LS+              N      ++ ALE K L  ++++P +
Sbjct: 183 DATQAGSVGDVTTLSSDLSVAAATSRVGFNIGRINGRLLDLELSALEQKQLLDIIASPRL 242

Query: 403 LTLENQPAVIDFNR--TQYITPGRDYATILPVTVGT-SLQVVPRV-TTGRGVHQIHLAVD 458
           L    QPA I         ++ G   AT +        ++V P V   GR   ++H++ +
Sbjct: 243 LASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQN 302

Query: 459 IEDGNFDETNPDRDPNHPDVRRGKVSTQAVMQEKRSLVVGGFHVTDSSDQQKKIPLLGDI 518
           +      +     D     + + ++ TQ  ++   +L +GG     +      +PLLGDI
Sbjct: 303 VP----GQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFSRKNKSGSDSVPLLGDI 358

Query: 519 PLLGKALFSSTERHNNRRERLFILTPRVIGDQ 550
           P LG+ LF    + + RRE +  +TPR++  +
Sbjct: 359 PWLGQ-LFRHDGKEDERRELVVFITPRLVATE 389