Pairwise Alignments

Query, 713 a.a., secretin from Pseudomonas simiae WCS417

Subject, 695 a.a., type II secretion system secretin GspD from Dickeya dianthicola ME23

 Score = 92.0 bits (227), Expect = 9e-23
 Identities = 93/421 (22%), Positives = 171/421 (40%), Gaps = 62/421 (14%)

Query: 181 QFSSQRRSPDEKQSVLSYPLKFANAADRQVDYRGEKLVVPGVANILRGLLEPRSPSALTG 240
           Q + +  +P++K +    PL + N A R +  +G   +   ++ ++  +  P   S +  
Sbjct: 225 QSTFRNLTPEDKNA----PLIYGNDATRTIMVKGGAHLRAEISRLISAMDVPGQQSRVFF 280

Query: 241 LTQRPASQPAPLTPN--------VPRLGNPLLSQMLDANGTTGQMAP-MPA--------- 282
           L    A Q A L  N         P  GN +  + + A  + G M+   PA         
Sbjct: 281 LKYADAVQMAKLFTNNNNPSGSPEPAGGNTMSMEAMLAQQSPGSMSSGQPANLDGQAASG 340

Query: 283 --------------LTSRAPVSTSRIRVEADVRNNAVLIYDLPERQTMYRELITQLDVAR 328
                         + S       + RV AD  NNA+++   P        +I QLDV  
Sbjct: 341 GTTPAADFSNDSNSMFSDGDTLVRQTRVHADRDNNALVVSAPPAAMQQAASIIQQLDVRH 400

Query: 329 KLIEIDAIILDIERTQLREFGVNWGFQN---------------SRFRGGVNMAPGTSSQL 373
           + + ++AI++++++ +    G+ WG +N               S+    VN   GT   +
Sbjct: 401 EQVLVEAIVVEVQKAEGLNLGIAWGNKNYGGSNFNSINVGNGFSQANPLVNALKGTEGLV 460

Query: 374 SIDNRDRFYADIRALEAKGLATMVSNPSVLTLENQPAVIDFNRTQYITPGRD-------Y 426
           +      +     ALE+     +V+ PSV+TL+N  A  +  +   I  G         +
Sbjct: 461 AGFYHGNWGTLFNALESNKSNNIVATPSVVTLDNHRAEFNVGQDVPILTGSQTTNNDNIF 520

Query: 427 ATILPVTVGTSLQVVPRVTTGRGVHQIHLAVDIEDGNFDETNPDRDPNHPDVRRGKVSTQ 486
            T+   T+G    ++PR+        I L +  E  +  +T    +          V+  
Sbjct: 521 NTVQRRTIGIKFSILPRINQS---GTILLTISQEISSLSDTAQVNNNLGAVFNIRTVNNV 577

Query: 487 AVMQEKRSLVVGGFHVTDSSDQQKKIPLLGDIPLLGKALFSSTERHNNRRERLFILTPRV 546
             +Q+  ++V+GG    +  +   K+PLLGDIP LG  +F  T  ++++R  +  + PR+
Sbjct: 578 VQVQDNETVVIGGLLDDEKKETVNKVPLLGDIPWLGN-VFRYTSHNDDKRNLMLFIRPRI 636

Query: 547 I 547
           I
Sbjct: 637 I 637