Pairwise Alignments

Query, 183 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 190 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 64.3 bits (155), Expect = 1e-15
 Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 1/147 (0%)

Query: 30  LRRFIHKRVLNPEDADDLLQLTYLEAWRNRERFSGNATLSTWMCGIAQNLIRNHFRRM-Y 88
           L RF+       E A+++ Q T+L   R+  +  G A+  TW+  IA+N + +H+R+   
Sbjct: 36  LYRFLVSLSNKAELAEEIYQETWLSLIRSATQPQGRASFRTWLFQIARNRLIDHWRKHGI 95

Query: 89  AKPVHCEFDESLWHGQEDNRNLDWEFEVNRRLEKTLSAIDHLPVEMRKTLYASLETDGSY 148
             P+H  +DE L    +D+   + +  ++R   +  +A+  LP + R+     L  D   
Sbjct: 96  HNPLHDSYDEQLHAQADDSAGPEQQLSLSRDQARLDAALQGLPEDQREVFLLRLHGDLEV 155

Query: 149 QDTADALDIPIGTVRSRLSRAREQLKR 175
              A     P+ TV+SRL  A+++L+R
Sbjct: 156 PQIAALTGTPLETVKSRLRYAQQKLRR 182