Pairwise Alignments

Query, 183 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 173 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 63.9 bits (154), Expect = 1e-15
 Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 29/157 (18%)

Query: 30  LRRFIHKRVLNPEDADDLLQLTYLEAWRNRERFSGNATLSTWMCGIAQNL---------I 80
           L R+  +   N  DA+DL+Q   + A+ N + +     L  W+  I  N+         +
Sbjct: 15  LMRYARRLTGNESDAEDLVQDALVRAYANADSYQRGRPLRVWLFSILHNVFVSGTRRAAV 74

Query: 81  RNHFRR---MYAKPVHCEFDESLWHGQEDNRNLDWEFEVNRRLEKTLSAIDHLPVEMRKT 137
           R  FR      A+PV     E +                  RL +  +A+  LP E +  
Sbjct: 75  RERFRADAVAQAEPVAAPAQEQMV-----------------RLHQIEAALTALPEEQQTV 117

Query: 138 LYASLETDGSYQDTADALDIPIGTVRSRLSRAREQLK 174
           L+       SYQD ADA+ IPIGT+ SRLSRAR +L+
Sbjct: 118 LHLVAVEGLSYQDAADAIGIPIGTLISRLSRARAKLR 154