Pairwise Alignments

Query, 364 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

Subject, 318 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

 Score =  162 bits (409), Expect = 1e-44
 Identities = 116/350 (33%), Positives = 170/350 (48%), Gaps = 55/350 (15%)

Query: 5   RVGIIFGGRSAEHEVSLQSARNIVDALDRSRFDPVLIGIDKAGHWHLNDTSNFLLNQENP 64
           RV ++FGG+SAE EVSL+S   ++DAL  +  +    GID    +               
Sbjct: 19  RVAVLFGGKSAEREVSLKSGNAVLDALQSAGVNA--FGIDVGDDF--------------- 61

Query: 65  ALIALNQSNRELAVVPGKANQQLVETSGTGLLEHVDVIFPIVHGTLGEDGCLQGLLRMAD 124
             IA  Q+                        E +D  F I+HG  GEDG +QGLL  A 
Sbjct: 62  --IARLQA------------------------EKIDRAFIILHGRGGEDGSMQGLLECAG 95

Query: 125 LPFVGSDVLGSAVCMDKDISKRLLRDAGIAVTPFITLTRSNAARTSFEAAVNKLGLPMFV 184
           +P+ GS VL SA+ MDK  +K++    GI       L     +     +A  +LGLP+ V
Sbjct: 96  IPYTGSGVLASALAMDKLRTKQVWHSLGIPTPRHSVL----CSEDDCISAAKELGLPLIV 151

Query: 185 KPANQGSSVGVSKVGDEAEYHAAVELALGFDEKVLVESAVKGREIECAVLGNE--NPIAS 242
           KPA++GSS+G++KV   AE   A + A  +D +VLVE  ++G E   A L  +   PIA 
Sbjct: 152 KPAHEGSSIGMAKVNSAAELIDAWKAASTYDSQVLVEQWIQGPEYTIATLRGQVLPPIAL 211

Query: 243 GCGEIVVSSGFYSYDSKYIDDQAAQVVVPADISQEASERIRGLAIEAFEVLGCSGLARVD 302
           G         FY YD+KY+     Q  +P  +     + +  L  +A E LG +G AR D
Sbjct: 212 G-----TPHTFYDYDAKYLASD-TQYRIPCGLDASKEQELMDLTAKACEALGIAGWARAD 265

Query: 303 VFLTDDGEVLINEINSLPGFTRISMYPKLWQAAGMSYSELVSRLIELALE 352
           V   D G+    E+N+ PG T  S+ P   +AAG+ + +LV  ++  ++E
Sbjct: 266 VMQDDQGDFWFLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAILADSIE 315