Pairwise Alignments

Query, 364 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

Subject, 323 a.a., D-alanine--D-alanine ligase (EC 6.3.2.4) from Variovorax sp. SCN45

 Score =  166 bits (421), Expect = 6e-46
 Identities = 111/348 (31%), Positives = 172/348 (49%), Gaps = 46/348 (13%)

Query: 5   RVGIIFGGRSAEHEVSLQSARNIVDALDRSRFDPVLIGIDKAGHWHLNDTSNFLLNQENP 64
           +V ++FGG SAE E+SL S   +++AL RSR      G+D                    
Sbjct: 11  KVAVLFGGSSAEREISLMSGTGVLEAL-RSR------GVDAH------------------ 45

Query: 65  ALIALNQSNRELAVVPGKANQQLVETSGTGLLEHVDVIFPIVHGTLGEDGCLQGLLRMAD 124
              A + S RELA +  +   +                F  +HG  GEDG +QG L +  
Sbjct: 46  ---AFDPSQRELADLKREGFARC---------------FVALHGRHGEDGTVQGALELLG 87

Query: 125 LPFVGSDVLGSAVCMDKDISKRLLRDAGIAVTPFITLTRSNAARTSFEAAVNKLGLPMFV 184
           +P+ GS V+ S+V MDK ++KR+ +  G+    ++ L     +R    A  + LGLP+ V
Sbjct: 88  IPYTGSGVMASSVAMDKVMTKRIWQADGLPTPKYVRLAFDQQSREQIMAVPDVLGLPLIV 147

Query: 185 KPANQGSSVGVSKVGDEAEYHAAVELALGFDEKVLVESAVKGREIECAVLGNE-NPIASG 243
           KP  +GSS+GV+KV   ++   A+ L+  +D  VL E  ++G E+ CAVLG+  +  A  
Sbjct: 148 KPPREGSSIGVTKVEGYSQMQDAITLSAKYDADVLCEEFIEGEEVTCAVLGHGLDARALP 207

Query: 244 CGEIVVSSGFYSYDSKYIDDQAAQVVVPADISQEASERIRGLAIEAFEVLGCSGLARVDV 303
              I    G Y Y +KY  D   +   P+ +       I+ +A+ A+  LGC G  R DV
Sbjct: 208 VVRIAAPEGAYDYQNKYFTDD-VKYQCPSGLPDAEEHEIQRIALAAYRTLGCRGWGRADV 266

Query: 304 FL-TDDGEVLINEINSLPGFTRISMYPKLWQAAGMSYSELVSRLIELA 350
            +   D +  + E+N+ PG T  S+ P   +AAG++Y EL  R++  A
Sbjct: 267 MIRASDRKPFLLEMNTSPGMTSHSLVPMSARAAGIAYEELCVRVLASA 314