Pairwise Alignments

Query, 364 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

Subject, 318 a.a., D-alanine--D-alanine ligase B from Pseudomonas putida KT2440

 Score =  159 bits (403), Expect = 7e-44
 Identities = 111/345 (32%), Positives = 167/345 (48%), Gaps = 55/345 (15%)

Query: 5   RVGIIFGGRSAEHEVSLQSARNIVDALDRSRFDPVLIGIDKAGHWHLNDTSNFLLNQENP 64
           RV +++GG+SAE EVSL+S   ++DAL  +  D V I +                     
Sbjct: 19  RVAVLYGGKSAEREVSLKSGAAVIDALSTAGVDVVAIDV-------------------GD 59

Query: 65  ALIALNQSNRELAVVPGKANQQLVETSGTGLLEHVDVIFPIVHGTLGEDGCLQGLLRMAD 124
            L+A  QS                        E +D  F I+HG  GEDG +QGLL    
Sbjct: 60  DLLARLQS------------------------EKIDRAFIILHGRGGEDGSMQGLLECLG 95

Query: 125 LPFVGSDVLGSAVCMDKDISKRLLRDAGIAVTPFITLTRSNAARTSFEAAVNKLGLPMFV 184
           +P+ GS +L SA+ MDK  +K++ +  GI       L    A+ +    A  +LG P+ V
Sbjct: 96  IPYTGSGILASALAMDKLRTKQVWQSLGIPTPRHAVL----ASESDCLQASTELGFPLIV 151

Query: 185 KPANQGSSVGVSKVGDEAEYHAAVELALGFDEKVLVESAVKGREIECAVLGNE--NPIAS 242
           KPA++GSS+G++KV    E  AA + A  +D +VLVE  + G E   AVL  +   PIA 
Sbjct: 152 KPAHEGSSIGMAKVNSTQELVAAWQDAAKYDSQVLVEQWIHGPEFTIAVLRGQVLPPIAL 211

Query: 243 GCGEIVVSSGFYSYDSKYIDDQAAQVVVPADISQEASERIRGLAIEAFEVLGCSGLARVD 302
           G   +     FY YD+KYI +   Q  +P  +     + +  L   A + +G  G  R+D
Sbjct: 212 GTPHV-----FYDYDAKYIVND-TQYRIPCGLDSVKEQELIDLTARACDAIGIEGWGRLD 265

Query: 303 VFLTDDGEVLINEINSLPGFTRISMYPKLWQAAGMSYSELVSRLI 347
           V   + G   + E+N+ PG T  S+ P   +AAG+ + +LV  ++
Sbjct: 266 VMQDEQGRFWLLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAIL 310