Pairwise Alignments

Query, 273 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  160 bits (406), Expect = 2e-44
 Identities = 94/267 (35%), Positives = 145/267 (54%), Gaps = 15/267 (5%)

Query: 18  SGLDRIEAYFAGFAFDPHRHDTYAIGRTLMGVQSFHYRGDMVHSLPGTTMVLHPDETHDG 77
           +G++ + A+F G A+DPH HD++ +G T  GVQ F+ R     S PG   +L P + HDG
Sbjct: 13  TGIESVRAHFVGHAYDPHWHDSFLVGVTEQGVQQFNCRRVRHRSTPGQVFLLEPGDIHDG 72

Query: 78  HAGSDEGFKYRMIYVEPSLIQQILG-------GKPLPFIPNGLSTDPRLFRASEVLLQNL 130
            A ++EGF Y  +Y+EP+ + Q L        G  LP   + L  D RL RA+ +  + +
Sbjct: 73  LAPTEEGFTYSTLYLEPAWLDQQLRALYEHAPGDSLPSFADTLCHDERLARATALAFRAV 132

Query: 131 ENPIDPLQEQDALFDLAHALSNVSGAIISRKTFDY-----VAAERAREFIHSALGRSITL 185
            +    +  Q A+ DL   L+     +  R+  +      + A+RAR+F+H+ L R I L
Sbjct: 133 HDQDLRIVRQTAMDDLLACLTR---HLHWRRRINPDPRLPLTAQRARDFLHANLERDIGL 189

Query: 186 DEMANHAGRDRWALSRDFRLLFGTSPYRYLTMRRLDLVRSLLAQGQSLVDAAMTAGFTDQ 245
           +++A   G DR+ L+R F+  FG +P+ YL   RL   R LLAQGQ+  + A+  GF DQ
Sbjct: 190 EDLAQACGIDRFRLTRAFKAAFGIAPHAYLIQLRLARARRLLAQGQTPAEVAVALGFADQ 249

Query: 246 SHMTRQFRSTYGMPPSRWVKMSDRFQD 272
           SH+ R FR  Y + P+ + +      D
Sbjct: 250 SHLGRWFRRAYQLTPADYRRRCSNLPD 276