Pairwise Alignments

Query, 439 a.a., porin from Pseudomonas simiae WCS417

Subject, 420 a.a., porin from Pseudomonas simiae WCS417

 Score =  219 bits (558), Expect = 1e-61
 Identities = 138/431 (32%), Positives = 215/431 (49%), Gaps = 31/431 (7%)

Query: 11  SLCAALPFTAVAAQDPPEGFIEGSTVNVLARNFYFNRDDRKGQSSPTG-NGYSEAWAQGL 69
           SL   LP +  A     +GFIE +   +  RN YFNR+     ++PT   G +E W Q  
Sbjct: 19  SLAFTLPLSVQA-----DGFIEDAKATLNLRNAYFNRNF----TNPTNPQGKAEEWTQNF 69

Query: 70  IGRFESGFTQGTVGFGLDAFAMVGVKLDSGTGRSGGKGSFGVLPVDSSNHPEDNYSKVGG 129
           I   +SG+T GTVGFG+D   +   KLD G G  G +    +LP+ S   P DN+ ++G 
Sbjct: 70  ILDAKSGYTTGTVGFGIDVLGLYSQKLDGGKGTGGTQ----LLPIHSDGRPADNFGRLGV 125

Query: 130 AAKLRVLDTVIKAGDVFPLTPVVAYGDSRVLPESFRGVTAQNTSLEGLSLQGGRLTGMSQ 189
           A K ++  T +K G+  P+ P++   D R LP++FRG    +  + GL+L GG+  G S 
Sbjct: 126 ALKTKLSKTELKVGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSP 185

Query: 190 PAQSGMDKGFATFYAGPVDSPWIGYFGGDYTVN-KNLSFSLYSSRLKDAWDQYYFGSAAR 248
              + M+  F    A    S    + GG+Y+ N K     ++ + L D + Q YF     
Sbjct: 186 RNDASMEDMFMNGKAA-FTSDRFNFGGGEYSFNDKRTQVGVWYAELSDIYQQQYFNLTHS 244

Query: 249 YPLNDEVSLFGDFNYYKAVDEGKKRLGAFDNNIWSARLGVKVGAHSLAVSHQRNNGDDDF 308
            P+ D  +L  +  ++   ++G    G  DN    A L  K   ++  V  Q+  GD  +
Sbjct: 245 QPVGD-WTLGANLGFFTGKEDGSALAGDLDNKTAFALLSAKYNGNTFYVGLQKLTGDSVW 303

Query: 309 DYLRQSDSIFLNNSIQYSDFNSPKERSWMVRYDLDMQAFGIPGLSFMTRYGKGSGADYSN 368
             +  +    L N    + +++ KE+SW VR+D +    GIPGL+ M RY  GS      
Sbjct: 304 MRVNGTSGGTLANDSYNASYDNAKEKSWQVRHDFNFVVLGIPGLTLMNRYISGSNV---- 359

Query: 369 ANAVYMRRDGAGNPLTDQRRWERDIEASYVVQAGRLKDLSLRLRQATVRSSAFESDLEEV 428
                    GA   +TD + W R+ E +Y VQ+G LKDL++R R +T+R     ++ +E 
Sbjct: 360 -------HTGA---ITDGKEWGRESELAYTVQSGALKDLNVRWRNSTMRRDFSNNEFDEN 409

Query: 429 RVIVEYPIAVL 439
           R+ + YPI++L
Sbjct: 410 RLFISYPISLL 420