Pairwise Alignments

Query, 439 a.a., porin from Pseudomonas simiae WCS417

Subject, 416 a.a., porin from Pseudomonas simiae WCS417

 Score =  226 bits (577), Expect = 8e-64
 Identities = 134/432 (31%), Positives = 219/432 (50%), Gaps = 26/432 (6%)

Query: 10  LSLCAALPFTAVAAQDPPEGFIEGSTVNVLARNFYFNRDDRKGQSSPT-GNGYSEAWAQG 68
           L L  A+   A+       GF+E ++ N+  RNF+FNR+     ++PT   G ++ W Q 
Sbjct: 9   LLLATAVASLALPVVAEEHGFLEDASANLNLRNFFFNRN----YTNPTKAQGGAQEWTQS 64

Query: 69  LIGRFESGFTQGTVGFGLDAFAMVGVKLDSGTGRSGGKGSFGVLPVDSSNHPEDNYSKVG 128
            I   +SGFTQGTVGFG+D   +  +KLD G G  G +    +LP+D    P D + ++G
Sbjct: 65  FILDAKSGFTQGTVGFGVDVLGLYSLKLDGGRGTGGTQ----LLPLDHDGRPADEFGRLG 120

Query: 129 GAAKLRVLDTVIKAGDVFPLTPVVAYGDSRVLPESFRGVTAQNTSLEGLSLQGGRLTGMS 188
            A K R+  T +K G+  P+ P++   D R LP++ RG    +  ++GL+L GG+    S
Sbjct: 121 VAFKARISKTEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRANS 180

Query: 189 QPAQSGMDKGFATFYAGPVDSPWIGYFGGDYTVN-KNLSFSLYSSRLKDAWDQYYFGSAA 247
               S M+   + F      S    + G +Y  N K     L++++LKD + Q +     
Sbjct: 181 PRDDSSMND-LSMFGKTAFTSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINLIH 239

Query: 248 RYPLNDEVSLFGDFNYYKAVDEGKKRLGAFDNNIWSARLGVKVGAHSLAVSHQRNNGDDD 307
             PL +  +L  +  ++   D+G  R G  DN  WS     K G ++  +  Q+  G+  
Sbjct: 240 SQPLGNW-TLGANLGFFYGKDDGSARAGELDNKTWSGLFSAKYGGNTFYLGLQKLTGNSA 298

Query: 308 FDYLRQSDSIFLNNSIQYSDFNSPKERSWMVRYDLDMQAFGIPGLSFMTRYGKGSGADYS 367
           +  +  +    L N    + +++ +E+SW VR+D +  A G+PGL+ M RY  GS     
Sbjct: 299 WMRVNGTSGGTLANDSYNASYDNAQEKSWQVRHDYNFAALGVPGLTLMNRYISGSNVHTG 358

Query: 368 NANAVYMRRDGAGNPLTDQRRWERDIEASYVVQAGRLKDLSLRLRQATVRSSAFESDLEE 427
                          +TD + W R+ E  Y VQ+G LK+L++RLR +++R     ++ +E
Sbjct: 359 T--------------VTDGKEWGRESELGYTVQSGSLKNLTVRLRNSSMRRDYSNNEFDE 404

Query: 428 VRVIVEYPIAVL 439
            R+IV YPI++L
Sbjct: 405 NRLIVSYPISLL 416