Pairwise Alignments

Query, 439 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  248 bits (632), Expect = 3e-70
 Identities = 157/432 (36%), Positives = 229/432 (53%), Gaps = 28/432 (6%)

Query: 8   LHLSLCAALPFTAVAAQDPPEGFIEGSTVNVLARNFYFNRDDRKGQSSPTGNGYSEAWAQ 67
           L +SL   L   A A +    GF+E +   +  RN+YFNRD R   ++    G  E WAQ
Sbjct: 13  LAVSLAFGLGLPAWAQEG---GFLEDAKGGLTLRNYYFNRDFRDPGAA---KGKVEEWAQ 66

Query: 68  GLIGRFESGFTQGTVGFGLDAFAMVGVKLDSGTGRSGGKGSFGVLPVDSSNHPEDNYSKV 127
           G I +F SG+T G +GFGLD  A+ GVKLDSG G SG +    +LPV       D+Y + 
Sbjct: 67  GFIFKFSSGYTPGLIGFGLDGIALFGVKLDSGGGTSGSE----LLPVHDDGRAADDYGRA 122

Query: 128 GGAAKLRVLDTVIKAGDVFPLTPVVAYGDSRVLPESFRGVTAQNTSLEGLSLQGGRLTGM 187
           G AAKLR+  T +K G++ P  P++ Y D R+LP++FRG    +  +EGLSLQ G+   +
Sbjct: 123 GLAAKLRMSATELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREV 182

Query: 188 SQPAQSGMDKGFATFYAGPVDSPWIGYFGGDYTVNKNLS-FSLYSSRLKDAWDQYYFGSA 246
           S    S M +  + + A  V S    Y G +Y  N+  +    + S+L+D + Q YF   
Sbjct: 183 SLRHSSDM-QDLSAWAAPGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLL 241

Query: 247 ARYPLNDEVSLFGDFNYYKAVDEGKKRLGAFDNNIWSARLGVKVGAHSLAVSHQRNNGDD 306
               +  E +L  +  Y+   D+G+ R+G   +    A L      H+L +  Q+ +GD 
Sbjct: 242 HSQRVG-EWTLGANLGYFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDS 300

Query: 307 DFDYLRQSDSIFLNNSIQYSDFNSPKERSWMVRYDLDMQAFGIPGLSFMTRYGKGSGADY 366
            +  +  S    L N +   +F++  ERSW VRYD +  A G+PGL  M RYG G  A  
Sbjct: 301 QWMSVYGSSGRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVRYGHGENA-- 358

Query: 367 SNANAVYMRRDGAGNPLTDQRRWERDIEASYVVQAGRLKDLSLRLRQATVRSSAFESDLE 426
                       AG   ++ + WERD E +Y  Q+G LK+L++RL  AT R S F SDL+
Sbjct: 359 ---------TTAAG---SNGKEWERDAEVNYTFQSGALKNLNIRLNNATNRRS-FNSDLD 405

Query: 427 EVRVIVEYPIAV 438
           + R+IV YP+ +
Sbjct: 406 QTRLIVSYPLTL 417