Pairwise Alignments

Query, 439 a.a., porin from Pseudomonas simiae WCS417

Subject, 420 a.a., putative Aromatic compound-specific porin from Pseudomonas putida KT2440

 Score =  231 bits (590), Expect = 2e-65
 Identities = 141/419 (33%), Positives = 221/419 (52%), Gaps = 19/419 (4%)

Query: 19  TAVAAQDPPEGFIEGSTVNVLARNFYFNRDDRKGQSSPTGNGYSEAWAQGLIGRFESGFT 78
           T + A      F+E    ++  RNFY+NRD R   ++ +     + WAQG I   +SGFT
Sbjct: 14  TLLVAPYASAAFVEDFKGSLELRNFYYNRDFRNDGATQSKR---DEWAQGFILNLQSGFT 70

Query: 79  QGTVGFGLDAFAMVGVKLDSGTGRSGGKGSFGVLPVDSSNHPEDNYSKVGGAAKLRVLDT 138
           +G VGFG+DA  ++GVKLDS   R+G     G+L  DS    ED Y K    AK R+  T
Sbjct: 71  EGPVGFGIDAMGLLGVKLDSSPDRTGS----GLLAYDSDRQVEDEYGKFVATAKARMGKT 126

Query: 139 VIKAGDVFPLTPVVAYGDSRVLPESFRGVTAQNTSLEGLSLQGGRLTGMSQPAQSGMDKG 198
            ++ G V PL P++   +SR+LP+ FRG +     ++ L++   R+  + Q   +  +  
Sbjct: 127 ELRIGGVNPLMPLLWSNNSRLLPQVFRGGSLTVNDIDKLTVTATRINAVKQRNSTDFESL 186

Query: 199 FATFYAGPVDSPWIGYFGGDYTVNKNLSFSLYSSRLKDAWDQYYFGSAARYPLNDEVSLF 258
            AT YA PV++    Y   D+   K+++FSL+++ L+D +  Y+ G     PL  E ++ 
Sbjct: 187 TATGYA-PVEADHYNYLAFDFKPAKDMTFSLHAAELEDLYKSYFAGIKVIKPL-WEGNVI 244

Query: 259 GDFNYYKAVDEGKKRLGAFDNNIWSARLGVKVGAHSLAVSHQRNNGDDDFDYLRQSDSIF 318
            D   + A + G K+LG  DN   S+     +  H++   +Q+  GD  F ++  +D+  
Sbjct: 245 ADVRVFDASETGSKKLGEVDNRTLSSYFAYSIKGHTIGGGYQKAWGDTSFAFVNGTDTYL 304

Query: 319 LNNSIQYSDFNSPKERSWMVRYDLDMQAFGIPGLSFMTRYGKGSGAD---YSNANAVYMR 375
              S+  S F +P+ER W  RYD D  A G+PGL F TRY KG   +    ++  A  +R
Sbjct: 305 FGESL-VSTFTAPEERVWFARYDFDFAALGVPGLLFTTRYMKGDDVNPDLLTSRQAASLR 363

Query: 376 RDGAGNPLTDQRRWERDIEASYVVQAGRLKDLSLRLRQATVRSSAFESDLEEVRVIVEY 434
            +G      D + WER  + SYV+Q+G  K +S + R +T RS+ +     E R+I+ Y
Sbjct: 364 LNG-----EDGKEWERVTDISYVIQSGPAKGVSFQWRNSTNRST-YADSANENRLIMRY 416