Pairwise Alignments

Query, 439 a.a., porin from Pseudomonas simiae WCS417

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  619 bits (1595), Expect = 0.0
 Identities = 300/441 (68%), Positives = 361/441 (81%), Gaps = 9/441 (2%)

Query: 8   LHLSLCAALPFTA---VAAQDPPEGFIEGSTVNVLARNFYFNRDDRKG------QSSPTG 58
           L L+ C AL       VAA+   +GF+EGST++VL RNFYFNRD+R         S    
Sbjct: 7   LTLAACLALAGVGSQVVAAEKSADGFMEGSTLSVLNRNFYFNRDNRDSVAPTHNPSKQAD 66

Query: 59  NGYSEAWAQGLIGRFESGFTQGTVGFGLDAFAMVGVKLDSGTGRSGGKGSFGVLPVDSSN 118
           NGYSEAW   +I RFESGFTQGTVG GLDAFAM+G+KLD+G GR+GG+ SF VLPVD   
Sbjct: 67  NGYSEAWGHAVITRFESGFTQGTVGVGLDAFAMLGLKLDTGGGRNGGRSSFDVLPVDRDG 126

Query: 119 HPEDNYSKVGGAAKLRVLDTVIKAGDVFPLTPVVAYGDSRVLPESFRGVTAQNTSLEGLS 178
              D Y+KVGGAAKLR+ DTV+K GDVFP  PVVA GDSR+LPESFRGVT +N+S++ L+
Sbjct: 127 QARDEYTKVGGAAKLRLFDTVLKVGDVFPANPVVAAGDSRLLPESFRGVTLENSSIKDLT 186

Query: 179 LQGGRLTGMSQPAQSGMDKGFATFYAGPVDSPWIGYFGGDYTVNKNLSFSLYSSRLKDAW 238
           LQ GRL  MSQP  S + + F TFY GPVDSPWI Y GGDY +N+++S SL+SSRLKDAW
Sbjct: 187 LQAGRLHAMSQPMSSDLRENFVTFYGGPVDSPWIAYGGGDYRLNEHVSVSLFSSRLKDAW 246

Query: 239 DQYYFGSAARYPLNDEVSLFGDFNYYKAVDEGKKRLGAFDNNIWSARLGVKVGAHSLAVS 298
           +QYY G++  +PL++ ++L G FNYYKAVDEG++RLGAFDN+IWSA+LGV+ GAH+LA++
Sbjct: 247 NQYYAGTSLSWPLSEALALIGGFNYYKAVDEGQQRLGAFDNDIWSAKLGVRFGAHTLALT 306

Query: 299 HQRNNGDDDFDYLRQSDSIFLNNSIQYSDFNSPKERSWMVRYDLDMQAFGIPGLSFMTRY 358
           HQRNNGDDDFDYLRQSDSIFL+NSIQYSDFN+PKERSWM+RYDL+M A+G+PGLSFMTRY
Sbjct: 307 HQRNNGDDDFDYLRQSDSIFLDNSIQYSDFNAPKERSWMLRYDLNMAAYGVPGLSFMTRY 366

Query: 359 GKGSGADYSNANAVYMRRDGAGNPLTDQRRWERDIEASYVVQAGRLKDLSLRLRQATVRS 418
           GKG+ ADYSNANA YMRRD AGNPLTDQ+RWERDIE  YVVQ G  KDLSLR+RQAT R+
Sbjct: 367 GKGNDADYSNANATYMRRDVAGNPLTDQKRWERDIEVKYVVQTGAAKDLSLRVRQATTRA 426

Query: 419 SAFESDLEEVRVIVEYPIAVL 439
           +AFESDL+EVR+IVEYP+++L
Sbjct: 427 TAFESDLDEVRMIVEYPLSIL 447