Pairwise Alignments

Query, 439 a.a., porin from Pseudomonas simiae WCS417

Subject, 418 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  228 bits (581), Expect = 3e-64
 Identities = 148/435 (34%), Positives = 219/435 (50%), Gaps = 36/435 (8%)

Query: 10  LSLCAALPFTAVAAQDPPEGFIEGSTVNVLARNFYFNRDDRKGQSSPTGNGYSEAWAQGL 69
           L++  ALP  A AA +   GFIE +   +  RNFY NR+     + P G   +E W Q  
Sbjct: 15  LAMSCALP--AFAANEG--GFIEDAKATLNLRNFYINRNF-VDPAHPQGK--AEEWTQSF 67

Query: 70  IGRFESGFTQGTVGFGLDAFAMVGVKLDSGTGRSGGKGSFGVLPVDSSNHPEDNYSKVGG 129
           I    SGFTQGTVGFG+D   +  VKLD G G +       +LPV     P D++ ++G 
Sbjct: 68  ILDARSGFTQGTVGFGVDVLGLYSVKLDGGKGTTNTH----LLPVHGDGRPADDFGRLGV 123

Query: 130 AAKLRVLDTVIKAGDVFPLTPVVAYGDSRVLPESFRGVTAQNTSLEGLSLQGGRLTGMSQ 189
           A K ++ +T +K G+  P+ P++   D R LP++FRG    +  + GL+L  G+  G S 
Sbjct: 124 ALKAKLSETELKVGEWMPVLPILRSDDGRSLPQTFRGGQLTSREIAGLTLYAGQFRGNSP 183

Query: 190 PAQSGMD----KGFATFYAGPVDSPWIGYFGGDYTVN-KNLSFSLYSSRLKDAWDQYYFG 244
              + M+     G A F      S    + GG+YT N K     L+ ++LKD + Q Y  
Sbjct: 184 RNDASMEDMSLNGKAAF-----TSDRFNFGGGEYTFNDKRTMIGLWDAQLKDIYRQQYLN 238

Query: 245 SAARYPLNDEVSLFGDFNYYKAVDEGKKRLGAFDNNIWSARLGVKVGAHSLAVSHQRNNG 304
                PL D  +L  +  Y+   ++G +R G  DN   SA L  +   H+  V  Q+ +G
Sbjct: 239 LTHSQPLGDW-TLGANLGYFIGKEDGAERAGKLDNRTASALLSARYQGHTFYVGLQKVSG 297

Query: 305 DDDFDYLRQSDSIFLNNSIQYSDFNSPKERSWMVRYDLDMQAFGIPGLSFMTRYGKGSGA 364
           DD +  +  +    L N    S F++ KERSW VR+D +    G+PGL+ M RY KG   
Sbjct: 298 DDAWMRVNGTSGGTLANDSYNSSFDNAKERSWQVRHDFNFATVGVPGLTLMNRYIKGDNV 357

Query: 365 DYSNANAVYMRRDGAGNPLTDQRRWERDIEASYVVQAGRLKDLSLRLRQATVRSSAFESD 424
              + +              D + W R+ E +YVVQ+G  KDLSL+ R +T+R     + 
Sbjct: 358 TVGSVD--------------DGKEWARETELAYVVQSGSFKDLSLKWRNSTMRRDFSTNA 403

Query: 425 LEEVRVIVEYPIAVL 439
            +E R+IV YP+ +L
Sbjct: 404 FDENRLIVSYPLNLL 418