Pairwise Alignments

Query, 478 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 469 a.a., copper sensor protein from Pseudomonas putida KT2440

 Score =  219 bits (557), Expect = 2e-61
 Identities = 157/467 (33%), Positives = 246/467 (52%), Gaps = 26/467 (5%)

Query: 4   SSLSMRLGLTVSLMGAGLVVLLASLAYLALT-HELDKLARKGLENKMEQLAHTL-----G 57
           SSL  RL L + +     V+++A +++  L+ H    L  + L  K+E   H L     G
Sbjct: 6   SSLVKRLTLMI-MFAVIAVLVVAGISFNMLSQHHFRMLDEQALSEKLESTRHILSIQAPG 64

Query: 58  QGLDEHRITNRPHSLLDLVMGHDNIYLTIIGARSDAPVLLSVGAKPQQPLLLDVPTGKNL 117
            G++E R       L  L+  H ++   I+   S+  VL S     Q P        + +
Sbjct: 65  TGMEELR-----PQLRALLGAHQDLTAEIL--TSEGEVLFSDLKAVQIPDKYKRADKEEM 117

Query: 118 AYLNWVDGQGNRILSATRLMPLQGGEYV-RVLLSLDRSDDEALLSAYLRSTVIALPMLLI 176
               W D + +     T  + +QG      V+L LD +          R   I L ++  
Sbjct: 118 --WEWQD-ESHNFRGITTDVEIQGQPAPGTVMLMLDITSHAHFFETLQRWFAIGL-VISA 173

Query: 177 LIGMGAWWLVQR-GLAPLQQFSRVAAKVSTQDLTHRLSLDNLPKELGELAQGINFMLHRL 235
           L+  G  WLV + GL P++Q ++VA  +S + L  R+ L+ +P EL  L    N ML RL
Sbjct: 174 LVSAGIGWLVAKSGLRPVEQITKVATSISARSLQERIPLEPVPLELQTLILSFNGMLARL 233

Query: 236 DAGVQQLTQFSDDLAHELRAPLTNLMGKAQVTLSRERPSDEYKASLESCTEEMERLSRMV 295
           +    +L+ FS D+AHELR P++NL+   +V L+R+R  D Y+ +L S  E+++R+SRM+
Sbjct: 234 EDAFVRLSNFSADIAHELRTPVSNLLTHTEVVLTRKRDVDAYEENLYSNLEDLKRMSRMI 293

Query: 296 SDMLFLAQVSHPAARAGFAPVSLEQEAQRVMELFALSAEDKNVSLTLRGDAWVTGDRLMI 355
            DMLFLA+  +         + L     ++ E + L A+D+ + LTL+G   ++GDRLMI
Sbjct: 294 DDMLFLAKSDNGLIIPEQVDIQLHDLVSKLFEYYQLLADDRGIRLTLQGKGVISGDRLMI 353

Query: 356 QRAISNLLSNAIRHTPRDASVLLLVESYEQSVSLSVGNPGRGIEAHHLPHLFERFYRADN 415
            RA+SN+LSNA+R+TP  + + + ++     V+L++ N G  I+  H+  +F+RFYRAD 
Sbjct: 354 DRAVSNILSNAVRYTPDGSGISVEIQQAADKVTLTIKNGGATIDPQHINKIFDRFYRAD- 412

Query: 416 SRARAEGG---TGLGLAIVQSIMHLHQGHADVSSQPGRFTRFSLVFP 459
             AR EGG    GLGLAI +SI+  H G    +S  G  T F+ +FP
Sbjct: 413 -PARREGGPSNAGLGLAITRSIVKAHDGKVWCTSSEG-VTAFNFIFP 457