Pairwise Alignments

Query, 406 a.a., type I secretion protein TolC from Pseudomonas simiae WCS417

Subject, 439 a.a., Heavy metal RND efflux outer membrane protein, CzcC family from Variovorax sp. SCN45

 Score =  123 bits (308), Expect = 1e-32
 Identities = 112/384 (29%), Positives = 167/384 (43%), Gaps = 30/384 (7%)

Query: 24  QTLTLDSALQTAFANNPDLAAAQWEIDIAQGGRQQAG--LIPNPVASWDVEDTRRD---- 77
           Q L+L    + A  +NP L A + E+  A+G R  A   L  NPV S D   TRR     
Sbjct: 41  QGLSLTEVWRLAEESNPALRAKRAELASAEGSRTDANAFLYNNPVVSLD--GTRRTVPQE 98

Query: 78  ------SRTTSIKISQALELGGKRGARIDVASRVQDAAALTLEQRRNSLRAEVIDNYYGA 131
                  R  S  + Q  E+ G+RG R + A     A    + + R  +R EV   YY  
Sbjct: 99  GASSERRREWSSSVQQTFEIAGQRGFRREAADAALMALQEEIAETRRQVRVEVAQLYYRV 158

Query: 132 LRAQERLDLAQRSMTLAERGLVVANGRVTAGKASPVEATRAQVQLSEIRLERDRAQMGLT 191
           L  Q+R +L ++++ L E        R  AG+ + +++  A V+    R +   A+  L 
Sbjct: 159 LALQQRTELEEQALGLFESTAAAVQKRRIAGEDTKLDSNVAAVEAERARNQLAVAKEQLI 218

Query: 192 DAYRRLAASTGSAAPNF-QAVATRNPSTLAVPSATQLLARLEQTAELRLAELSILQYEAS 250
           DA   LAA       +  QA     P+  A  S   LL++++    L+          A 
Sbjct: 219 DARAELAAKLQLRMESLPQASGELRPTASAAYSLESLLSQVDSQPRLQALRAREDSARAK 278

Query: 251 IGLEKAQRIPDL--DVSIGSQYDASVRERVSLVGVSMPIPLFNRNQGNVLAATRRADQAR 308
           + LE A R PDL   V +G +  +  RER++ V VS+P+PLF RN   +  A+    QA 
Sbjct: 279 LKLESASRYPDLTVGVGVGREGASGARERLTTVSVSVPLPLFKRNAAGIGQASSALTQAE 338

Query: 309 DLRNATELRLRTETRQAVDLW---QSANTEVRVFNQQILPAAQSAVDSATRGFEMGKFSF 365
             R+A    LR    Q   LW   +S    V    +++LPA       + +    G+   
Sbjct: 339 ISRSA---GLRDAQAQVRALWAKLESLRDRVTRLQERVLPALLDNQQLSVKSQRAGQIGL 395

Query: 366 LDV-------LDAQRTLIAARTQY 382
           L++       LDA+R LI A   Y
Sbjct: 396 LELIVVNRQALDARRDLIDALIDY 419