Pairwise Alignments

Query, 767 a.a., mammalian cell entry protein from Pseudomonas simiae WCS417

Subject, 541 a.a., intermembrane transport protein PqiB from Dickeya dianthicola ME23

 Score =  166 bits (421), Expect = 2e-45
 Identities = 90/310 (29%), Positives = 172/310 (55%), Gaps = 10/310 (3%)

Query: 15  WSAIWVLPLIALIIGGWLGWRAYSQQGIDIQVRFESGEGIQVNKTEVVYKGMPVGKVKAL 74
           WS +W++P++ ++IG W+ +   S QG +I +   + EGI   KT +  + + VG V+++
Sbjct: 10  WSPVWIVPIVTVLIGAWILFYHVSHQGPEITLTTSNAEGIDAGKTTIKSRSVNVGVVESV 69

Query: 75  ALDDEGNNRGVIATIEMNKDVDQYLKTNTRFWLVKPSVSLAGITGLETLVSGNYIAASPG 134
            L ++ +   + A   +N  +D+ L  ++ FW+VKP +   G++GL TL+SG++I   PG
Sbjct: 70  MLSEDLHQVEIKA--RLNDGMDKLLSKDSAFWVVKPQIGREGVSGLGTLLSGSFIELQPG 127

Query: 135 DG-EPTRKFKALSEEPPLSDAKPGLHLTVKADRLGSLNRGSPVFYKQIQVGQVKSYLLSE 193
            G E +R FK L   P  S    G+ + + +D+ G L  G PV ++  +VG V++     
Sbjct: 128 SGKEDSRAFKLLDSPPLASPDAQGIRIVLNSDQSGQLTAGDPVLFRGYRVGSVETSHFDP 187

Query: 194 DQSTVEIKVYIEPTYASLVRKHTRFWNASGISIDANLSGVKVRSESLSSIVAGGIAFATP 253
               ++ ++++   Y  LV  + RFW  SG++++ +  G++V   SLS++++GG++F  P
Sbjct: 188 TARKMQYQLFVAAPYDQLVTANVRFWKDSGVALNLSAQGMRVEMGSLSTLLSGGVSFDVP 247

Query: 254 ENRKDSPPTDPSLPFRLYEDFDAAAAGIRVKVK--LTDFE----GLQAGRTPVMYKGIQV 307
              +          F+L+++ ++    +  + K  L  F+    GLQAG  PV ++GI++
Sbjct: 248 VGWEVGGQAHERDEFQLFDNQNSIQDSLYTEYKEYLLFFDESVRGLQAG-APVEFRGIRL 306

Query: 308 GSLKTLKVDP 317
           G++  +   P
Sbjct: 307 GTVAEVPFFP 316



 Score =  136 bits (342), Expect = 3e-36
 Identities = 79/236 (33%), Positives = 123/236 (52%), Gaps = 3/236 (1%)

Query: 516 NQHGTLVTIKVDRADGMRPG-TPVRFKGLDVGKIESVDLSADMQSVLLSARITQVADRIA 574
           +  G  +T+    A+G+  G T ++ + ++VG +ESV LS D+  V + AR+    D++ 
Sbjct: 33  SHQGPEITLTTSNAEGIDAGKTTIKSRSVNVGVVESVMLSEDLHQVEIKARLNDGMDKLL 92

Query: 575 RAGSQFWVVKPELGLMKTSNLETLVTGQYIEVLPAAKNAGPQKSFVALDQPPEAVHQEAG 634
              S FWVVKP++G    S L TL++G +IE+ P +      ++F  LD PP A     G
Sbjct: 93  SKDSAFWVVKPQIGREGVSGLGTLLSGSFIELQPGS-GKEDSRAFKLLDSPPLASPDAQG 151

Query: 635 LSLTLSAARRGSLKEGVPVTYREVTVGKVTGYELGQTADRVLIHILIEPKYAPLVRSGSR 694
           + + L++ + G L  G PV +R   VG V       TA ++   + +   Y  LV +  R
Sbjct: 152 IRIVLNSDQSGQLTAGDPVLFRGYRVGSVETSHFDPTARKMQYQLFVAAPYDQLVTANVR 211

Query: 695 FWNTSGFGLDFGLFKGATVRTESLETLVAGGIAFATPDGERMGNPARPQQTFALFD 750
           FW  SG  L+    +G  V   SL TL++GG++F  P G  +G  A  +  F LFD
Sbjct: 212 FWKDSGVALNLSA-QGMRVEMGSLSTLLSGGVSFDVPVGWEVGGQAHERDEFQLFD 266



 Score =  133 bits (334), Expect = 3e-35
 Identities = 78/280 (27%), Positives = 146/280 (52%), Gaps = 11/280 (3%)

Query: 280 GIRVKVKLTDFEGLQAGRTPVMYKGIQVGSLKTLKVDPDLSSANAELTLDPLAEDYLVQD 339
           G  + +  ++ EG+ AG+T +  + + VG ++++ +  DL     +  L+   +  L +D
Sbjct: 36  GPEITLTTSNAEGIDAGKTTIKSRSVNVGVVESVMLSEDLHQVEIKARLNDGMDKLLSKD 95

Query: 340 TQFWVVKPSISLAGITGLEALVKGNYIAIRPGDKGTAPQREFVARAKAPPLDLRSPGLHM 399
           + FWVVKP I   G++GL  L+ G++I ++PG  G    R F      P     + G+ +
Sbjct: 96  SAFWVVKPQIGREGVSGLGTLLSGSFIELQPG-SGKEDSRAFKLLDSPPLASPDAQGIRI 154

Query: 400 VLFTDNLGSLDVGSPILYKQVKVGSVQSYQFSRKNKQLVIGVHIEKEYENLVNGSTRFWN 459
           VL +D  G L  G P+L++  +VGSV++  F    +++   + +   Y+ LV  + RFW 
Sbjct: 155 VLNSDQSGQLTAGDPVLFRGYRVGSVETSHFDPTARKMQYQLFVAAPYDQLVTANVRFWK 214

Query: 460 ASGVTLTGGLTGGIQVKSESLASLMAGGIAFETP---EPNVPLKKRIPRFRLFADREAA- 515
            SGV L      G++V+  SL++L++GG++F+ P   E      +R   F+LF ++ +  
Sbjct: 215 DSGVALNLS-AQGMRVEMGSLSTLLSGGVSFDVPVGWEVGGQAHER-DEFQLFDNQNSIQ 272

Query: 516 ----NQHGTLVTIKVDRADGMRPGTPVRFKGLDVGKIESV 551
                ++   +    +   G++ G PV F+G+ +G +  V
Sbjct: 273 DSLYTEYKEYLLFFDESVRGLQAGAPVEFRGIRLGTVAEV 312



 Score = 58.9 bits (141), Expect = 7e-13
 Identities = 66/296 (22%), Positives = 126/296 (42%), Gaps = 31/296 (10%)

Query: 157 GLHLTVKADRLGSLNRG-SPVFYKQIQVGQVKSYLLSEDQSTVEIKVYIEPTYASLVRKH 215
           G  +T+       ++ G + +  + + VG V+S +LSED   VEIK  +      L+ K 
Sbjct: 36  GPEITLTTSNAEGIDAGKTTIKSRSVNVGVVESVMLSEDLHQVEIKARLNDGMDKLLSKD 95

Query: 216 TRFWNASGISIDANLSGVKVRSESLSSIVAGGIAFATPENRKDSPPTDPSLPFRLYEDFD 275
           + FW          +SG       L ++++G      P + K+      S  F+L +   
Sbjct: 96  SAFWVVKPQIGREGVSG-------LGTLLSGSFIELQPGSGKED-----SRAFKLLDSPP 143

Query: 276 AA---AAGIRVKVKLTDFEGLQAGRTPVMYKGIQVGSLKTLKVDPDLSSANAELTLDPLA 332
            A   A GIR+ +       L AG  PV+++G +VGS++T   DP       +L +    
Sbjct: 144 LASPDAQGIRIVLNSDQSGQLTAG-DPVLFRGYRVGSVETSHFDPTARKMQYQLFVAAPY 202

Query: 333 EDYLVQDTQFWV---VKPSISLAGIT----GLEALVKGNY---IAIRPGDKGTAPQRE-- 380
           +  +  + +FW    V  ++S  G+      L  L+ G     + +     G A +R+  
Sbjct: 203 DQLVTANVRFWKDSGVALNLSAQGMRVEMGSLSTLLSGGVSFDVPVGWEVGGQAHERDEF 262

Query: 381 --FVARAKAPPLDLRSPGLHMVLFTDNLGSLDVGSPILYKQVKVGSVQSYQFSRKN 434
             F  +             +++ F +++  L  G+P+ ++ +++G+V    F  +N
Sbjct: 263 QLFDNQNSIQDSLYTEYKEYLLFFDESVRGLQAGAPVEFRGIRLGTVAEVPFFPRN 318