Pairwise Alignments

Query, 767 a.a., mammalian cell entry protein from Pseudomonas simiae WCS417

Subject, 877 a.a., MCE domain protein from Escherichia coli BL21

 Score =  305 bits (780), Expect = 9e-87
 Identities = 214/694 (30%), Positives = 349/694 (50%), Gaps = 32/694 (4%)

Query: 16  SAIWVLPLIALIIGGWLGWRAYSQQGIDIQVRFESGEGIQVNKTEVVYKGMPVGKVKALA 75
           S  W+LP IAL+I GWL W +Y  +G  + + F S +GI   +T V Y+G+ VG V+ ++
Sbjct: 21  SPFWLLPFIALMIAGWLIWDSYQDRGNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDIS 80

Query: 76  LDDEGNNRGVIATIEMNKDVDQYLKTNTRFWLVKPSVSLAGITGLETLVSGNYIAASPGD 135
           L D+   R +   + +  D+   L+  T+FWLV P  SLAG++GL+ LV GNYI   PG 
Sbjct: 81  LSDD--LRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGK 138

Query: 136 GEPTRKFKALSEEPPLSDAKPGLHLTVKADRLGSLNRGSPVFYKQIQVGQVKSYLLSEDQ 195
           G+    F AL  +P        L + ++A  LGSLN GS V++++I VG+V  Y ++ ++
Sbjct: 139 GKEQDHFVALDTQPKYRLDNGDLMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNK 198

Query: 196 STVEIKVYIEPTYASLVRKHTRFWNASGISIDANLSGVKVRSESLSSIVAGGIAFATPEN 255
             V I V IE  +  LV+K +RFWN SG+  + ++SG KV+ ESL+++V G IAF +PE 
Sbjct: 199 QGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKLESLAALVNGAIAFDSPE- 257

Query: 256 RKDSPPTDPSLPFRLYEDFDAAAAGIRVKVKLTDFEGLQAGRTPVMYKGIQVGSLKTLKV 315
             +S P +    F LYED   +  G+ +K++L    GL A  TP+MY+G++VG L  L +
Sbjct: 258 --ESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDL 315

Query: 316 DPDLSSANAELTLDPLAEDYLVQDTQFWVVKPSISLAGITGLEALVKGNYIAIRPGDKGT 375
           +P       E+T+DP     L ++T+  +  P +SL+    L AL+ G    + PGD   
Sbjct: 316 NPG-GKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSD-ANLSALLTGKTFELVPGD--G 371

Query: 376 APQREFVARAKAPPLDLRSPGLHMVLFTDNLGSLDVGSPILYKQVKVGSVQSYQFSRKNK 435
            P++EFV       L      L + L       +D G P++   V+VG V   + +  +K
Sbjct: 372 EPRKEFVVVPGEKALLHEPDVLTLTLTAPESYGIDAGQPLILHGVQVGQVIDRKLT--SK 429

Query: 436 QLVIGVHIEKEYENLVNGSTRFWNASGVTLTGGLTGGIQVKSESLASLMAGGIAFETPEP 495
            +   V IE ++  LV G ++F   S V +  GL  G++    S +  + GGI    P  
Sbjct: 430 GVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGL-DGVEFLGASASEWINGGIRI-LPGD 487

Query: 496 NVPLKKRIPRFRLFADREAANQHG------TLVTIKVDRADGMRPGTPVRFKGLDVGKIE 549
              +K   P   L+A+ E A ++       T V++  +    ++ G+ V ++  +VG++ 
Sbjct: 488 KGEMKASYP---LYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVI 544

Query: 550 SVDLSADMQSVLLSARITQVADRIARAGSQFWV---VKPELG----LMKTSNLETLVTGQ 602
           +V   A+   + L   I      +  + S FW     K +L      ++ S L   + G 
Sbjct: 545 TVRPRANAFDIDL--HIKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGA 602

Query: 603 YIEVLPAAKNAGPQKSFVALDQPPEAVHQEAGLSLTLSAARRGSLKEGVPVTYREVTVGK 662
                 +  +A  +K    +    E   +  G  +TL A   G L  G+P+ Y  + +G+
Sbjct: 603 ISFDNLSGASASQRKGDKRILYASETAARAVGGQITLHAFDAGKLAVGMPIRYLGIDIGQ 662

Query: 663 VTGYELGQTADRVLIHILIEPKYA-PLVRSGSRF 695
           +   +L    + V    ++ P+Y     R G+RF
Sbjct: 663 IQTLDLITARNEVQAKAVLYPEYVQTFARGGTRF 696



 Score =  232 bits (592), Expect = 6e-65
 Identities = 206/749 (27%), Positives = 353/749 (47%), Gaps = 59/749 (7%)

Query: 43  DIQVRFESGEGIQVNKTEVVY-KGMPVGKVKALALDDEGNNRGVIATIEMNKDVDQYLKT 101
           D+ +  ++ +   +N   +VY + +PVGKV   A++   N +GV+  + + +     +K 
Sbjct: 160 DLMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINP--NKQGVVIDVLIERRFTDLVKK 217

Query: 102 NTRFWLVK---PSVSLAG----ITGLETLVSGNYIAASPGDGEPTRKFKALSEEPPLSDA 154
            +RFW V     +VS++G    +  L  LV+G     SP + +P            L+ +
Sbjct: 218 GSRFWNVSGVDANVSISGAKVKLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHS 277

Query: 155 KPGLHLTVKADRLGSLNRGS-PVFYKQIQVGQVKSYLLSEDQSTVEIKVYIEPTYASLVR 213
           + G+ + ++      L   S P+ Y+ ++VGQ+    L+     V  ++ ++P+  +L+R
Sbjct: 278 QRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPG-GKVTGEMTVDPSVVTLLR 336

Query: 214 KHTRFWNASGISIDANLSGVKVRSESLSSIVAGGIAFATP---ENRKDSPPTDPSLPFRL 270
           ++TR        I+     + +   +LS+++ G      P   E RK+     P     L
Sbjct: 337 ENTR--------IELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVV-PGEKALL 387

Query: 271 YEDFDAAAAGIRVKVKLTDFEGLQAGRTPVMYKGIQVGSLKTLKVDPDLSSANAELT--L 328
           +E        + + +   +  G+ AG+ P++  G+QVG +    +D  L+S     T  +
Sbjct: 388 HEP-----DVLTLTLTAPESYGIDAGQ-PLILHGVQVGQV----IDRKLTSKGVTFTVAI 437

Query: 329 DPLAEDYLVQDTQFWVVKPSISLAGITGLEAL-------VKGNYIAIRPGDKGT--APQR 379
           +P   + +  D++F V        G+ G+E L       + G  I I PGDKG   A   
Sbjct: 438 EPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWINGG-IRILPGDKGEMKASYP 496

Query: 380 EFVARAKAPPLDLRS-PGLHMVLFTDNLGSLDVGSPILYKQVKVGSVQSYQFSRKNKQLV 438
            +    KA    L   P   + L  + L  +  GS +LY++ +VG V + +   +     
Sbjct: 497 LYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVR--PRANAFD 554

Query: 439 IGVHIEKEYENLVNGSTRFWNASG--VTLTGGLTGGIQVKSESLASLMAGGIAFETPEPN 496
           I +HI+ EY NL+  ++ FW   G  V L G    G+ V++  L+  + G I+F+     
Sbjct: 555 IDLHIKPEYRNLLTSNSVFWAEGGAKVQLNGS---GLTVQASPLSRALKGAISFDNLSGA 611

Query: 497 VPLKKRIPRFRLFADREAANQHGTLVTIKVDRADGMRPGTPVRFKGLDVGKIESVDLSAD 556
              +++  +  L+A   AA   G  +T+    A  +  G P+R+ G+D+G+I+++DL   
Sbjct: 612 SASQRKGDKRILYASETAARAVGGQITLHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITA 671

Query: 557 MQSVLLSARI-TQVADRIARAGSQFWVVKPELGLMKTSNLETLVTGQYIEVLPAAKNAGP 615
              V   A +  +     AR G++F VV P++      +L+T++   YI V P   N  P
Sbjct: 672 RNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQ-PYINVEPGRGN--P 728

Query: 616 QKSFVALDQPPEAVHQEAGLSLTLSAARRGSLKEGVPVTYREVTVGKVTGYELGQTADRV 675
           ++ F   +          GLS+ + A   GSL  G PV +R + VG VTG  LG  +DRV
Sbjct: 729 RRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRV 788

Query: 676 LIHILIEPKYAPLVRSGSRFWNTSGFGLDFGLFKGATVRTESLETLVAGGIAFATPDGER 735
           +I + I  +Y  LVR+ S FW  SG+ LDFGL  G  V+T +    + GGIAFATP G  
Sbjct: 789 MIAMRISKRYQHLVRNNSVFWLASGYSLDFGL-TGGVVKTGTFNQFIRGGIAFATPPGTP 847

Query: 736 MGNPARPQQTFALFDKFEDEWLTWAPKIP 764
           +   A+  + F L +    EW  W   +P
Sbjct: 848 LAPKAQEGKHFLLQESEPKEWREWGTALP 876



 Score =  149 bits (377), Expect = 5e-40
 Identities = 89/239 (37%), Positives = 129/239 (53%), Gaps = 7/239 (2%)

Query: 513 EAANQHGTLVTIKVDRADGMRPG-TPVRFKGLDVGKIESVDLSADMQSVLLSARITQVAD 571
           ++    G  VTI    ADG+ PG TPVR++G++VG ++ + LS D++ + +   I     
Sbjct: 40  DSYQDRGNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMK 99

Query: 572 RIARAGSQFWVVKPELGLMKTSNLETLVTGQYIEVLPAAKNAGPQKSFVALDQPPEAVHQ 631
              R  +QFW+V P+  L   S L+ LV G YI ++P       Q  FVALD  P+    
Sbjct: 100 DALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPG--KGKEQDHFVALDTQPKYRLD 157

Query: 632 EAGLSLTLSAARRGSLKEGVPVTYREVTVGKVTGYELGQTADRVLIHILIEPKYAPLVRS 691
              L + L A   GSL  G  V +R++ VGKV  Y +      V+I +LIE ++  LV+ 
Sbjct: 158 NGDLMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKK 217

Query: 692 GSRFWNTSGFGLDFGLFKGATVRTESLETLVAGGIAFATPDGERMGNPARPQQTFALFD 750
           GSRFWN SG   +  +  GA V+ ESL  LV G IAF +P+  +   PA  + TF L++
Sbjct: 218 GSRFWNVSGVDANVSI-SGAKVKLESLAALVNGAIAFDSPEESK---PAEAEDTFGLYE 272