Pairwise Alignments

Query, 528 a.a., cytochrome oxidase subunit I from Pseudomonas simiae WCS417

Subject, 672 a.a., cytochrome o ubiquinol oxidase subunit I from Pseudomonas simiae WCS417

 Score =  382 bits (980), Expect = e-110
 Identities = 200/513 (38%), Positives = 305/513 (59%), Gaps = 15/513 (2%)

Query: 24  WVLTTNHKDIGTLYLWFAFAMFLLGGSFAMVIRAELFQ-----PGLQIVQPAFFNQMTTM 78
           W+ + +HK IG +Y+  A  M L G + A+++R +L       PG   + P  ++Q+ T 
Sbjct: 48  WLTSVDHKKIGVMYVIVAMVMLLRGFADAIMMRTQLAMATEGSPGY--LPPEHYDQIFTA 105

Query: 79  HGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFTPGG 138
           HG+IM+    MP F GL N  +PL IGA D+A P +N+ SFWLL +  ++L++     G 
Sbjct: 106 HGVIMIIFMAMPFFTGLMNLALPLQIGARDVAYPFLNSLSFWLLVSG-VVLINVSLGVGE 164

Query: 139 GPNFGWTFYAPLS-TTYAPE-SVTFFIFAIHLMGISSIMGAINVVATILNLRAPGMTLMK 196
               GW  Y PLS   Y+P   V ++I+A+ L G+ + +  +N +AT+L +RAPGM LM 
Sbjct: 165 FAKTGWVAYPPLSGLQYSPGVGVDYYIWALQLSGLGTTLTGVNFLATVLKMRAPGMKLMD 224

Query: 197 MPLFVWTWLITAFLLIAVMPVLAGCVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGH 256
           MP+F WT      L++A  P+LA  + ++ +D +     F+   GG+P+++ ++FW +GH
Sbjct: 225 MPIFTWTCTWANVLIVASFPILAATMALLSLDRYLDFHIFTNELGGNPMMYVNLFWAWGH 284

Query: 257 PEVYIMILPAFGAVSSIIPTFSRKPLFGYTSMVYATASIAFLSFIVWAHHMFVVGIPLVG 316
           PEVYI+ILPAFG  S +I TF+ K LFG+ SMVYA+ +I+ L F+VW HH F +G     
Sbjct: 285 PEVYILILPAFGIFSEVISTFTGKRLFGHHSMVYASGAISVLGFMVWLHHFFTMGSGASV 344

Query: 317 ELFFMYATLLIAVPTGVKVFNWVSTMWQGSLTFETPMLFAVAFVILFTIGGFSGLMLAIA 376
             FF  AT+LI++PTGVK+FNW+ T++ G L   + +L+ + F++ F IGG +G++LAI 
Sbjct: 345 NAFFGLATMLISIPTGVKLFNWLFTIYHGRLRMTSQVLWTLGFMVTFAIGGMTGVLLAIP 404

Query: 377 PADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGM 436
            ADF  H++ FV+AHFH V++ GA+FG  A   ++ PK  G    E  GK  FW    G 
Sbjct: 405 GADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFSFYFPKAFGFKLHEGWGKAAFWFWISGF 464

Query: 437 NMAFFPMHFVGLAGMPRRV-PDYNLQFADFNMVSSVGAFMFG---ATQIFFLFIVIKCIR 492
            +AF P++ +G  GM RR+    N ++  +  V+  GA M     A Q+  L++ ++  +
Sbjct: 465 FVAFMPLYALGFMGMTRRLNATTNPEWVPYLYVAMFGAVMIAVGIACQLIQLYVSVRDRK 524

Query: 493 GGTPAPAKPWDGAEGLEWSIPSPAPYHTFTTPP 525
                   PW+G   LEWS  SP P++ F   P
Sbjct: 525 QNACESGDPWNG-HTLEWSTSSPPPFYNFAVIP 556