Pairwise Alignments

Query, 528 a.a., cytochrome oxidase subunit I from Pseudomonas simiae WCS417

Subject, 654 a.a., cytochrome c oxidase subunit I from Variovorax sp. OAS795

 Score =  478 bits (1229), Expect = e-139
 Identities = 229/512 (44%), Positives = 330/512 (64%), Gaps = 6/512 (1%)

Query: 20  GLMRWVLTTNHKDIGTLYLWFAFAMFLLGGSFAMVIRAELFQPGLQIVQPAFFNQMTTMH 79
           G+M W+   NHK I   ++   F  F+ GG  A V+R +L +PG  +V P  +NQ+ TMH
Sbjct: 35  GVMGWLSAVNHKAIARRFIVTTFGFFVAGGLLAFVMRLQLARPGSTLVGPDLYNQLFTMH 94

Query: 80  GLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFTPGGG 139
           G  M+F   +P    +  +++PLM+G   +A PR+N F++W+     L+L    F  G G
Sbjct: 95  GSTMMFLFAVPVMQAVTIYLLPLMLGTRSVAFPRLNAFAYWIFLFGGLMLYVVFFL-GAG 153

Query: 140 PNFGWTFYAPLS-TTYAPESVT-FFIFAIHLMGISSIMGAINVVATILNLRAPGMTLMKM 197
           P+ GW  Y PL+   ++P   T F+   I    +S+++ AI V+ T+  LRAPGMTL ++
Sbjct: 154 PDVGWFSYVPLAGPDFSPGKRTDFWAQMITFTELSALVEAIVVITTVFKLRAPGMTLNRI 213

Query: 198 PLFVWTWLITAFLLIAVMPVLAGCVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHP 257
           PLF W  L+TAF+++  MP +    T ++ D   GT F++ A GGD VL+QH+FWFFGHP
Sbjct: 214 PLFAWAMLVTAFMILFAMPSVMLASTTLITDRLVGTHFYNPAEGGDAVLWQHLFWFFGHP 273

Query: 258 EVYIMILPAFGAVSSIIPTFSRKPLFGYTSMVYATASIAFLSFIVWAHHMFVVGIPLVGE 317
           EVY++ LP  G +S+IIPTF+R+P+FGYT+MV A  + AFL+F +W HHMF V +P +G+
Sbjct: 274 EVYLIFLPGLGFISAIIPTFARRPMFGYTAMVLALIATAFLAFGLWVHHMFAVNLPELGK 333

Query: 318 LFFMYATLLIAVPTGVKVFNWVSTMWQGSLTFETPMLFAVAFVILFTIGGFSGLMLAIAP 377
            FF  A++LIA+P+ V++F W++T+W G L F+TP+LF + F  +  +GG +G+MLA  P
Sbjct: 334 SFFTAASMLIAIPSAVQIFCWIATLWSGRLDFKTPLLFVLGFFFILVLGGMTGIMLASVP 393

Query: 378 ADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMN 437
            D Q HD+YFVVAH HYVL+ GA+F +F + YYW PK TG +  E LG+ +FWL F+G N
Sbjct: 394 LDLQVHDSYFVVAHLHYVLIGGAVFPLFGAFYYWYPKVTGRLMSERLGRWNFWLFFIGFN 453

Query: 438 MAFFPMHFVGLAGMPRRVPDY--NLQFADFNMVSSVGAFMFGATQIFFLFIVIKCIRGGT 495
           +AFFPMH +GL GMPRRV  Y   L +   N+V++VGA +   + + F+   ++ +R G 
Sbjct: 454 VAFFPMHLLGLRGMPRRVYTYQAGLGWDTLNLVATVGAVVIAVSVLLFMVNAVRSLRRGA 513

Query: 496 PAPAKPWDGAEGLEWSIPSPAPYHTFTTPPEV 527
            A A PW GA  LEW+  SP P   F   P V
Sbjct: 514 MAGANPW-GAGTLEWATESPPPPCNFHAIPVV 544