Pairwise Alignments

Query, 528 a.a., cytochrome oxidase subunit I from Pseudomonas simiae WCS417

Subject, 543 a.a., cytochrome c oxidase subunit I from Variovorax sp. OAS795

 Score =  786 bits (2030), Expect = 0.0
 Identities = 364/535 (68%), Positives = 427/535 (79%), Gaps = 9/535 (1%)

Query: 1   MSAVIDDHGHA------DHAHGPAKGLMRWVLTTNHKDIGTLYLWFAFAMFLLGGSFAMV 54
           MSAV+D HGHA      D  H    G  RWV  TNHKDIGTLYL F+F M ++GG  A++
Sbjct: 1   MSAVLDPHGHAHDGHAHDEHHAAPTGWRRWVFATNHKDIGTLYLLFSFTMLMVGGVLALM 60

Query: 55  IRAELFQPGLQIVQPAFFNQMTTMHGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRM 114
           IRAELFQPGLQ+V P  FNQ TTMHGLIMVFGA+MPAFVG ANWMIPL IGA DMA  RM
Sbjct: 61  IRAELFQPGLQLVNPELFNQFTTMHGLIMVFGAIMPAFVGFANWMIPLQIGASDMAFARM 120

Query: 115 NNFSFWLLPAAFLLLVSTLFTPGGGPNFGWTFYAPLSTTYAPESVTFFIFAIHLMGISSI 174
           NNFSFWLL  A L+LV + F PGG P  GWT YAPL+    P S+   IFA+H+MG SSI
Sbjct: 121 NNFSFWLLIPAALMLVGSFFMPGGAPAAGWTLYAPLTLQMGP-SMDAGIFAMHIMGASSI 179

Query: 175 MGAINVVATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGCVTMMLMDIHFGTS 234
           MG+IN++ TILN+RAPGMTLMKMP+F WTWLITA+LLIAVMPVLAG +TM L D HFGTS
Sbjct: 180 MGSINIIVTILNMRAPGMTLMKMPMFCWTWLITAYLLIAVMPVLAGAITMTLTDRHFGTS 239

Query: 235 FFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPTFSRKPLFGYTSMVYATAS 294
           FF+ AGGGDPV++QH+FWFFGHPEVYIMILPAFG +S I+P FSRK LFGY SMVYAT+S
Sbjct: 240 FFNPAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIISQIVPAFSRKRLFGYASMVYATSS 299

Query: 295 IAFLSFIVWAHHMFVVGIPLVGELFFMYATLLIAVPTGVKVFNWVSTMWQGSLTFETPML 354
           IA LSFIVWAHHMF  G+P+ G+LFFMYAT+LIAVPT VK+FNW++TMWQGS+TFETPML
Sbjct: 300 IAILSFIVWAHHMFTTGMPVTGQLFFMYATMLIAVPTAVKIFNWIATMWQGSMTFETPML 359

Query: 355 FAVAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPK 414
           FAV F+ +FT+GGF+GL+LAIAP D Q  DTY+VVAHFHYVLV G+++ +FA  YYW PK
Sbjct: 360 FAVGFIFVFTMGGFTGLILAIAPIDIQLQDTYYVVAHFHYVLVAGSLYAMFAGYYYWAPK 419

Query: 415 WTGHMYDETLGKLHFWLSFVGMNMAFFPMHFVGLAGMPRRVPDYNLQFADFNMVSSVGAF 474
           WTG MY+E+ GKLHFW S +  N+ FFPMHF+GLAGMPRR  DY +QFADFN V+S+GAF
Sbjct: 420 WTGVMYNESRGKLHFWWSLISFNVTFFPMHFLGLAGMPRRYADYPMQFADFNAVASIGAF 479

Query: 475 MFGATQIFFLFIVI--KCIRGGTPAPAKPWDGAEGLEWSIPSPAPYHTFTTPPEV 527
            FG  Q++F F ++    +  G  AP KPW+ AEGLEW +PSPAP+HTF  PP +
Sbjct: 480 AFGLAQVYFFFFIVLPNMLGKGEKAPQKPWEAAEGLEWEVPSPAPFHTFENPPRL 534